RPSAP65 Gene (Pseudogene)

Ribosomal Protein SA Pseudogene 65

GC01P063263
GIFtS:
4
See more...

Aliases for RPSAP65 Gene

Aliases for RPSAP65 Gene

  • Ribosomal Protein SA Pseudogene 65 2 3 5
  • RPSAP65 5

External Ids for RPSAP65 Gene

Previous GeneCards Identifiers for RPSAP65 Gene

  • GC00U936485

Summaries for RPSAP65 Gene

GeneCards Summary for RPSAP65 Gene

RPSAP65 (Ribosomal Protein SA Pseudogene 65) is a Pseudogene.

Additional gene information for RPSAP65 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPSAP65 Gene

Genomics for RPSAP65 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPSAP65 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J063261 Enhancer 0.9 Ensembl ENCODE 600.7 +0.0 28 1 ZNF629 JUND PRDM1 CEBPA CEBPB MGA SMARCC2 NFE2 ZNF316 CHD2 RPSAP65 lnc-FOXD3-5 piR-52966-001 LINC00466 FOXD3 ATG4C
GH01J063257 Enhancer 0.4 UCNEbase 0.7 -4.7 -4712 0.3 ESR1 ENSG00000236674 ALG6 RPSAP65 ENSG00000228734 LINC00466 FOXD3 ATG4C
GH01J063255 Enhancer 0.4 Ensembl 0.4 -6.8 -6848 0.4 CEBPB EP300 STAT3 ENSG00000236674 ALG6 ENSG00000228734 RPSAP65 LINC00466 FOXD3 ATG4C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPSAP65 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPSAP65 Gene

Genomic Locations for RPSAP65 Gene
chr1:63,262,049-63,262,749
(GRCh38/hg38)
Size:
701 bases
Orientation:
Plus strand
chr1:63,727,784-63,728,378
(GRCh37/hg19)
Size:
595 bases
Orientation:
Plus strand

Genomic View for RPSAP65 Gene

Genes around RPSAP65 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP65 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP65 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPSAP65 Gene

Proteins for RPSAP65 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPSAP65 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP65 Gene

Domains & Families for RPSAP65 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPSAP65 Gene

Function for RPSAP65 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPSAP65 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP65 Gene

Localization for RPSAP65 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP65 Gene

Pathways & Interactions for RPSAP65 Gene

PathCards logo

SuperPathways for RPSAP65 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPSAP65 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPSAP65 Gene

Drugs & Compounds for RPSAP65 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPSAP65 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPSAP65 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP65 Gene

No ASD Table

Relevant External Links for RPSAP65 Gene

GeneLoc Exon Structure for
RPSAP65

Expression for RPSAP65 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP65 Gene

Orthologs for RPSAP65 Gene

Evolution for RPSAP65 Gene

ENSEMBL:
Gene Tree for RPSAP65 (if available)
TreeFam:
Gene Tree for RPSAP65 (if available)

No data available for Orthologs for RPSAP65 Gene

Paralogs for RPSAP65 Gene

No data available for Paralogs for RPSAP65 Gene

Variants for RPSAP65 Gene

Additional Variant Information for RPSAP65 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP65

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP65 Gene

Disorders for RPSAP65 Gene

No disorders were found for RPSAP65 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP65 Gene

Publications for RPSAP65 Gene

No publications were found for RPSAP65 Gene.

No data available for Mastermind for RPSAP65 Gene

Products for RPSAP65 Gene

Sources for RPSAP65 Gene