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RPSAP64 Gene(Pseudogene)

Ribosomal Protein SA Pseudogene 64

GCID:
GC21P038895
GIFtS:
10
Genes Participants
UDN Logo

Aliases for RPSAP64 Gene

Subcategory (RNA class) for RPSAP64 Gene

lncRNA

Aliases for RPSAP64 Gene

  • Ribosomal Protein SA Pseudogene 64 2 3 5

External Ids for RPSAP64 Gene

ORGUL Members for RPSAP64 Gene

Previous GeneCards Identifiers for RPSAP64 Gene

  • GC00U932439
  • GC21P040269

Summaries for RPSAP64 Gene

GeneCards Summary for RPSAP64 Gene

RPSAP64 (Ribosomal Protein SA Pseudogene 64) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPSAP64 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP64 Gene

Genomics for RPSAP64 Gene

GeneHancer (GH) Regulatory Elements for RPSAP64 Gene

Promoters and enhancers for RPSAP64 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH21J038830 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -62.7 -62713 3.2 ELF3 CBFA2T2 ZNF148 CEBPG BACH1 MCM2 TFE3 SP7 TRIM24 SP1 ETS2 ENSG00000229986 RPSAP64 HMGN1 ERG
GH21J038851 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 12.2 -42.4 -42413 6.2 ZFX ZKSCAN8 CBFA2T2 CEBPG ZSCAN21 BACH1 TRIM24 HNF1A ZNF639 SMARCA4 ETS2 RPSAP64 ENSG00000229986 LOC101928398
GH21J038816 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.6 -73.0 -73021 9.8 ELF3 CEBPG ZNF24 TFE3 SP1 HNF1A SP5 ZNF644 KAT8 FOSL2 ETS2 RPSAP64 ENSG00000229986 ERG
GH21J039093 Enhancer 1.6 FANTOM5 ENCODE dbSUPER 11.1 +201.7 201736 6.6 ELF3 CBFA2T2 MLLT1 CEBPG RERE NCOA3 BACH1 MAFK TFE3 TRIM24 ETS2 ENSG00000235888 RPSAP64 HMGN1 LCA5L RPL23AP12
GH21J038954 Enhancer 1.3 Ensembl ENCODE dbSUPER 11.8 +62.6 62616 6.5 ELF3 CBFA2T2 CEBPG ZSCAN21 BACH1 MAFK SP7 SP1 PRDM1 ZNF639 ENSG00000205622 RPSAP64 HMGN1 ERG LINC01700
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPSAP64 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP64 Gene

Genomic Locations for RPSAP64 Gene
chr21:38,894,914-38,895,252
(GRCh38/hg38)
Size:
339 bases
Orientation:
Plus strand
chr21:40,266,841-40,267,176
(GRCh37/hg19)
Size:
336 bases
Orientation:
Plus strand

Genomic View for RPSAP64 Gene

Genes around RPSAP64 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP64 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP64 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPSAP64 Gene

Proteins for RPSAP64 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPSAP64 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP64 Gene

Domains & Families for RPSAP64 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP64 Gene

Function for RPSAP64 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPSAP64 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP64 Gene

Localization for RPSAP64 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP64 Gene

Pathways & Interactions for RPSAP64 Gene

GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
PathCards logo

SuperPathways for RPSAP64 Gene

No Data Available

Interacting Proteins for RPSAP64 Gene

Gene Ontology (GO) - Biological Process for RPSAP64 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP64 Gene

Drugs & Compounds for RPSAP64 Gene

Products:

  1. Drug
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards
No Compound Related Data Available

Transcripts for RPSAP64 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPSAP64 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP64 Gene

No ASD Table

Relevant External Links for RPSAP64 Gene

GeneLoc Exon Structure for
RPSAP64
ECgene alternative splicing isoforms for
RPSAP64

Expression for RPSAP64 Gene

Products:

  1. Primer
GeneAnalytics - gene set analysis. Cells, Diseases, Pathways, Function and Compounds, relevant to your gene set. Powered by GeneCards

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP64 Gene

mRNA expression in normal human tissues for RPSAP64 Gene
mRNA expression by GTEx for RPSAP64 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP64 Gene

This gene is overexpressed in Liver (x53.0).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP64 Gene:

RPSAP64
genes like me logo Genes that share expression patterns with RPSAP64: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP64 Gene

Orthologs for RPSAP64 Gene

Evolution for RPSAP64 Gene

ENSEMBL:
Gene Tree for RPSAP64 (if available)
TreeFam:
Gene Tree for RPSAP64 (if available)

No data available for Orthologs for RPSAP64 Gene

Paralogs for RPSAP64 Gene

No data available for Paralogs for RPSAP64 Gene

Variants for RPSAP64 Gene

VarElect - NGS phenotyper. Rapid prioritization of variants from NGS data powered by 100+ GeneCards sources

Additional Variant Information for RPSAP64 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP64

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP64 Gene

Disorders for RPSAP64 Gene

No disorders were found for RPSAP64 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP64 Gene

Publications for RPSAP64 Gene

No publications were found for RPSAP64 Gene.

ExternalLinks

View latest publications for RPSAP64 gene in Mastermind

Products for RPSAP64 Gene

Sources for RPSAP64 Gene

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