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Aliases for RPSAP57 Gene
External Ids for RPSAP57 Gene
- HGNC: 35889
- NCBI Entrez Gene: 390857
- Ensembl: ENSG00000267524
Previous GeneCards Identifiers for RPSAP57 Gene
- GC18P050563
- GC18P052412
Summaries for RPSAP57 Gene
GeneCards Summary for RPSAP57 Gene
RPSAP57 (Ribosomal Protein SA Pseudogene 57) is a Pseudogene.
Additional gene information for RPSAP57 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPSAP57 Gene
Genomics for RPSAP57 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPSAP57 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH18J054742 | Enhancer | 1 | FANTOM5 Ensembl ENCODE dbSUPER | 250.7 | -2.0 | -1972 | 2.2 | MAFK BHLHE40 HLF EP300 CEBPB FOS NR2F2 | RPSAP57 CCDC68 POLI lnc-DYNAP-36 RAB27B | |
| GH18J054741 | Enhancer | 0.9 | Ensembl ENCODE dbSUPER | 0.7 | -4.5 | -4473 | 1.2 | CEBPB EP300 JUND ZNF316 NFE2 NFE2L2 MAFG MAFF ATF3 MAFK | POLI RPSAP57 lnc-DYNAP-36 RAB27B CCDC68 | |
| GH18J054734 | Enhancer | 0.9 | Ensembl ENCODE dbSUPER | 0.4 | -10.4 | -10444 | 0.7 | CEBPB EP300 RFX5 STAT3 JUND FOSL1 BHLHE40 JUNB ATF3 FOS | lnc-DYNAP-36 RPSAP57 RAB27B CCDC68 | |
| GH18J054737 | Enhancer | 0.6 | Ensembl dbSUPER | 0.4 | -6.3 | -6273 | 0.8 | JUND ZBTB33 FOS | RPSAP57 lnc-DYNAP-36 RAB27B CCDC68 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPSAP57 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPSAP57 Gene
Latest Assembly
- chr18:54,744,673-54,745,656
- (GRCh38/hg38)
- Size:
- 984 bases
- Orientation:
- Plus strand
Previous Assembly
- chr18:52,411,904-52,412,887
- (GRCh37/hg19 by Entrez Gene)
- Size:
- 984 bases
- Orientation:
- Plus strand
- chr18:52,411,981-52,412,812
- (GRCh37/hg19 by Ensembl)
- Size:
- 832 bases
- Orientation:
- Plus strand
Genomic View for RPSAP57 Gene
Genes around RPSAP57 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 18q21.2 by HGNC
- 18q21.2 by Entrez Gene
- 18q21.2 by Ensembl
RPSAP57 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPSAP57 Gene
Proteins for RPSAP57 Gene
Post-translational modifications for RPSAP57 Gene
No Post-translational modifications
Antibodies for research
Protein products for research
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPSAP57
- Origene Custom Protein Services for RPSAP57
Assay products for research
No data available for DME Specific Peptides for RPSAP57 Gene
Domains & Families for RPSAP57 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPSAP57 Gene
Function for RPSAP57 Gene
Animal Models for research
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPSAP57 - Starting at $85 >
- * RPSAP57 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPSAP57
miRNA products for research
Inhibitory RNAs for research
Clone products for research
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP57 Gene
Localization for RPSAP57 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP57 Gene
Transcripts for RPSAP57 Gene
mRNA/cDNA for RPSAP57 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000590033 832 nts (view in UCSC)
CRISPR products for research
- Applied Biological Materials (abm): CRISPR Clones for RPSAP57 - Starting at $85 >
- * RPSAP57 CRISPR as ready-to-use vector or virus: Non-viral | Lenti- | Adeno- | AAV- | siRNA - Browse All
- * Cas9 Nucleases, Nickases, Null Mutants, and GFP tag also available.
- Browse CRISPR knockouts for RPSAP57
miRNA products for research
Inhibitory RNAs for research
Clone products for research
Relevant External Links for RPSAP57 Gene
- GeneLoc Exon Structure for
- RPSAP57
Expression for RPSAP57 Gene
Primer products for research
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP57 Gene
Orthologs for RPSAP57 Gene
No data available for Orthologs for RPSAP57 Gene
Paralogs for RPSAP57 Gene
No data available for Paralogs for RPSAP57 Gene
Variants for RPSAP57 Gene
Additional Variant Information for RPSAP57 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPSAP57
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP57 Gene
Disorders for RPSAP57 Gene
Additional Disease Information for RPSAP57
- Genetic Association Database
- (GAD)
No disorders were found for RPSAP57 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP57 Gene
Publications for RPSAP57 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
No data available for Mastermind for RPSAP57 Gene
Products for RPSAP57 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPSAP57
- Origene Custom Protein Services for RPSAP57
- Browse OriGene Inhibitory RNA Products For RPSAP57
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPSAP57
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPSAP57
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPSAP57
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPSAP57
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPSAP57
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPSAP57
Sources for RPSAP57 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM® (Updated: 05-Mar-2021)
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) MedlinePlus Genetics
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNAcentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Open Targets Platform
- (175) 5SRRNADB
- (176) snoDB
- (177) MirGeneDB