Aliases for RPSAP56 Gene

Aliases for RPSAP56 Gene

  • Ribosomal Protein SA Pseudogene 56 2 3 5
  • RPSA_23_1496 3
  • AC092128.1 5

External Ids for RPSAP56 Gene

Previous GeneCards Identifiers for RPSAP56 Gene

  • GC16U900958
  • GC16M073975

Summaries for RPSAP56 Gene

GeneCards Summary for RPSAP56 Gene

RPSAP56 (Ribosomal Protein SA Pseudogene 56) is a Pseudogene.

Additional gene information for RPSAP56 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPSAP56 Gene

Genomics for RPSAP56 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPSAP56 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J073949 Enhancer 0.8 Ensembl ENCODE 0.4 -8.2 -8153 1.1 CREB1 CEBPB SMARCC1 JUND SMARCC2 OSR2 JUN FOS MAX EP300 ENSG00000259972 RPSAP56 LOC107984856 ZFHX3 ENSG00000261404 PSMD7
GH16J073945 Enhancer 0.3 UCNEbase 0.7 -4.2 -4167 0.2 RPSAP56 ZFHX3 LOC107984856 ENSG00000261404 PSMD7
GH16J073951 Enhancer 0.4 Ensembl ENCODE 0.4 -9.8 -9795 1 POLR2A RPSAP56 LOC107984856 ZFHX3 ENSG00000261404 PSMD7
GH16J073956 Enhancer 0.6 Ensembl 0.4 -15.2 -15219 0.4 CREB1 CTCF REST RAD21 TRIM22 SMC3 ZNF384 RCOR1 ZNF654 ZNF143 RPSAP56 LOC107984856 ZFHX3 ENSG00000261404 PSMD7
GH16J073997 Enhancer 0.6 ENCODE 0.2 -55.3 -55336 0.2 CEBPG GATAD2A PBX2 SOX13 FOXA2 HHEX CREM ZGPAT SMAD4 NFIA LOC107984856 RPSAP56 ZFHX3 ENSG00000261404 PSMD7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPSAP56 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPSAP56 Gene

Genomic Locations for RPSAP56 Gene
1,215 bases
Minus strand
1,036 bases
Minus strand

Genomic View for RPSAP56 Gene

Genes around RPSAP56 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP56 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP56 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP56 Gene

Proteins for RPSAP56 Gene

Post-translational modifications for RPSAP56 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP56 Gene

Domains & Families for RPSAP56 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPSAP56 Gene

Function for RPSAP56 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP56 Gene

Localization for RPSAP56 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP56 Gene

Pathways & Interactions for RPSAP56 Gene

PathCards logo

SuperPathways for RPSAP56 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPSAP56 Gene


No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPSAP56 Gene

Drugs & Compounds for RPSAP56 Gene

No Compound Related Data Available

Transcripts for RPSAP56 Gene

mRNA/cDNA for RPSAP56 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP56 Gene

No ASD Table

Relevant External Links for RPSAP56 Gene

GeneLoc Exon Structure for

Expression for RPSAP56 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPSAP56 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP56 Gene

This gene is overexpressed in Testis (x32.3).
genes like me logo Genes that share expression patterns with RPSAP56: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP56 Gene

Orthologs for RPSAP56 Gene

Evolution for RPSAP56 Gene

Gene Tree for RPSAP56 (if available)
Gene Tree for RPSAP56 (if available)

No data available for Orthologs for RPSAP56 Gene

Paralogs for RPSAP56 Gene

No data available for Paralogs for RPSAP56 Gene

Variants for RPSAP56 Gene

Additional Variant Information for RPSAP56 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP56 Gene

Disorders for RPSAP56 Gene

Additional Disease Information for RPSAP56

Genetic Association Database
Open Targets Platform

No disorders were found for RPSAP56 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP56 Gene

Publications for RPSAP56 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Beyond single-marker analyses: mining whole genome scans for insights into treatment responses in severe sepsis. (PMID: 22310353) Man M … Garcia JG (The pharmacogenomics journal 2013) 41

Products for RPSAP56 Gene

Sources for RPSAP56 Gene