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Aliases for RPSAP49 Gene

Aliases for RPSAP49 Gene

  • Ribosomal Protein SA Pseudogene 49 2 3 5
  • RPSA_21_995 3

External Ids for RPSAP49 Gene

Previous GeneCards Identifiers for RPSAP49 Gene

  • GC09P090130
  • GC09P090940

Summaries for RPSAP49 Gene

GeneCards Summary for RPSAP49 Gene

RPSAP49 (Ribosomal Protein SA Pseudogene 49) is a Pseudogene.

Additional gene information for RPSAP49 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP49 Gene

Genomics for RPSAP49 Gene

GeneHancer (GH) Regulatory Elements for RPSAP49 Gene

Promoters and enhancers for RPSAP49 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I088322 Enhancer 0.6 Ensembl ENCODE 550.8 -1.0 -1006 1.7 POLR2A MYC RPSAP49 SPIN1 GC09P088268
GH09I088310 Enhancer 0.6 ENCODE 0.4 -14.0 -13966 0.8 CTCF ATF1 RAD21 ZNF83 ZNF148 ZNF766 MTA1 PHF20 CREB1 PRDM10 SPIN1 RPSAP49 GC09P088268
GH09I088344 Enhancer 0.7 ENCODE 0.3 +20.2 20236 1 NCOA3 PKNOX1 ESRRA NFIB TEAD4 NEUROD1 ZKSCAN1 FOSL1 CTBP1 GATA3 SPIN1 GC09P088354 RPSAP49 GC09P088268
GH09I088303 Enhancer 0.7 ENCODE 0.3 -20.5 -20492 1.1 EBF1 BATF IRF4 FOSL1 EGR1 CBFA2T2 ETV6 FOS IKZF2 RUNX3 RPSAP49 GC09P088268
GH09I088270 Enhancer 0.8 ENCODE 0.2 -53.2 -53166 2 NFIB NEUROD1 SIN3A RCOR1 FOS USF2 CEBPB GATAD2B SREBF1 SP1 SPIN1 GC09P088268 RPSAP49
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP49 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP49 Gene

Genomic Locations for RPSAP49 Gene
1,030 bases
Plus strand

Genomic View for RPSAP49 Gene

Genes around RPSAP49 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP49 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP49 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP49 Gene

Proteins for RPSAP49 Gene

Post-translational modifications for RPSAP49 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP49 Gene

Domains & Families for RPSAP49 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP49 Gene

Function for RPSAP49 Gene

Phenotypes From GWAS Catalog for RPSAP49 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP49 Gene

Localization for RPSAP49 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP49 Gene

Pathways & Interactions for RPSAP49 Gene

SuperPathways for RPSAP49 Gene

No Data Available

Interacting Proteins for RPSAP49 Gene

Gene Ontology (GO) - Biological Process for RPSAP49 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPSAP49 Gene

Drugs & Compounds for RPSAP49 Gene

No Compound Related Data Available

Transcripts for RPSAP49 Gene

mRNA/cDNA for RPSAP49 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP49 Gene

No ASD Table

Relevant External Links for RPSAP49 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPSAP49 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP49 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP49 Gene:

genes like me logo Genes that share expression patterns with RPSAP49: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP49 Gene

Orthologs for RPSAP49 Gene

Evolution for RPSAP49 Gene

Gene Tree for RPSAP49 (if available)
Gene Tree for RPSAP49 (if available)

No data available for Orthologs for RPSAP49 Gene

Paralogs for RPSAP49 Gene

No data available for Paralogs for RPSAP49 Gene

Variants for RPSAP49 Gene

Additional Variant Information for RPSAP49 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP49 Gene

Disorders for RPSAP49 Gene

No disorders were found for RPSAP49 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP49 Gene

Publications for RPSAP49 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPSAP49 Gene

Sources for RPSAP49 Gene

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