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Aliases for RPSAP43 Gene

Aliases for RPSAP43 Gene

  • Ribosomal Protein SA Pseudogene 43 2 3 5
  • RPSA_12_742 3

External Ids for RPSAP43 Gene

Previous GeneCards Identifiers for RPSAP43 Gene

  • GC06M114513
  • GC06M114406
  • GC06M114407
  • GC06M114408
  • GC06M114409
  • GC06M114410
  • GC06M114411
  • GC06M114412
  • GC06M114413
  • GC06M114414

Summaries for RPSAP43 Gene

GeneCards Summary for RPSAP43 Gene

RPSAP43 (Ribosomal Protein SA Pseudogene 43) is a Pseudogene.

Additional gene information for RPSAP43 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP43 Gene

Genomics for RPSAP43 Gene

GeneHancer (GH) Regulatory Elements for RPSAP43 Gene

Promoters and enhancers for RPSAP43 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I114144 Enhancer 0.9 ENCODE 0.2 -60.7 -60738 1.8 ELF3 FOXA2 ARID4B RAD21 THRB ZNF48 ZSCAN9 RARA ETS1 ZNF335 FLJ34503 GC06P114168 RPSAP43 HDAC2-AS2 HS3ST5
GH06I114070 Enhancer 0.3 FANTOM5 0.4 +14.4 14432 0.2 HS3ST5 RPSAP43 GC06P114038 HDAC2-AS2
GH06I114164 Enhancer 0.6 ENCODE 0.2 -80.4 -80381 1.7 SOX13 GATAD2A HNF1A FOXA2 RCOR2 HNF4G HNF4A MIXL1 GC06P114168 RPSAP43 HS3ST5 HDAC2-AS2
GH06I114160 Enhancer 0.5 UCNEbase 0.2 -76.1 -76112 0.2 MAFK GC06P114168 RPSAP43 HS3ST5 HDAC2-AS2
GH06I114121 Enhancer 0.3 ENCODE 0.3 -37.6 -37582 1.1 HLF RPSAP43 GC06P114168 HDAC2-AS2 HS3ST5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP43 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP43 Gene

Genomic Locations for RPSAP43 Gene
696 bases
Minus strand

Genomic View for RPSAP43 Gene

Genes around RPSAP43 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP43 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP43 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP43 Gene

Proteins for RPSAP43 Gene

Post-translational modifications for RPSAP43 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP43 Gene

Domains & Families for RPSAP43 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP43 Gene

Function for RPSAP43 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP43 Gene

Localization for RPSAP43 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP43 Gene

Pathways & Interactions for RPSAP43 Gene

SuperPathways for RPSAP43 Gene

No Data Available

Interacting Proteins for RPSAP43 Gene

Gene Ontology (GO) - Biological Process for RPSAP43 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPSAP43 Gene

Drugs & Compounds for RPSAP43 Gene

No Compound Related Data Available

Transcripts for RPSAP43 Gene

mRNA/cDNA for RPSAP43 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP43 Gene

No ASD Table

Relevant External Links for RPSAP43 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPSAP43 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP43 Gene

mRNA expression in normal human tissues for RPSAP43 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP43 Gene:

genes like me logo Genes that share expression patterns with RPSAP43: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP43 Gene

Orthologs for RPSAP43 Gene

Evolution for RPSAP43 Gene

Gene Tree for RPSAP43 (if available)
Gene Tree for RPSAP43 (if available)

No data available for Orthologs for RPSAP43 Gene

Paralogs for RPSAP43 Gene

No data available for Paralogs for RPSAP43 Gene

Variants for RPSAP43 Gene

Additional Variant Information for RPSAP43 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP43 Gene

Disorders for RPSAP43 Gene

Additional Disease Information for RPSAP43

Genetic Association Database

No disorders were found for RPSAP43 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP43 Gene

Publications for RPSAP43 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association identifies ATOH7 as a major gene determining human optic disc size. (PMID: 20395239) Macgregor S … Mackey DA (Human molecular genetics 2010) 44 58
  3. A genome-wide association for kidney function and endocrine-related traits in the NHLBI's Framingham Heart Study. (PMID: 17903292) Hwang SJ … Fox CS (BMC medical genetics 2007) 44 58
  4. Genome-wide association with bone mass and geometry in the Framingham Heart Study. (PMID: 17903296) Kiel DP … Karasik D (BMC medical genetics 2007) 44 58
  5. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 44 58

Products for RPSAP43 Gene

Sources for RPSAP43 Gene

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