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Aliases for RPSAP4 Gene

Aliases for RPSAP4 Gene

  • Ribosomal Protein SA Pseudogene 4 2 3 5
  • Laminin Receptor 1 Pseudogene 4 2 3
  • RPSA_27_1403 3
  • LAMR1P4 3

External Ids for RPSAP4 Gene

Previous HGNC Symbols for RPSAP4 Gene

  • LAMR1P4

Previous GeneCards Identifiers for RPSAP4 Gene

  • GC14P094263
  • GC14P095193

Summaries for RPSAP4 Gene

GeneCards Summary for RPSAP4 Gene

RPSAP4 (Ribosomal Protein SA Pseudogene 4) is a Pseudogene.

Additional gene information for RPSAP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP4 Gene

Genomics for RPSAP4 Gene

GeneHancer (GH) Regulatory Elements for RPSAP4 Gene

Promoters and enhancers for RPSAP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH14I093953 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 7.1 -766.2 -766212 13.2 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B SIN3A FEZF1 DMAP1 IRF4 BTBD7 SERPINA1 CCDC197 DDX24 UBR7 IFI27L2 IFI27 RPSAP4 FAM181A-AS1 ASB2
GH14I094768 Promoter/Enhancer 1.5 EPDnew Ensembl ENCODE 0.3 +43.3 43315 2.4 SIN3A ZNF76 ZNF335 GLIS2 SMARCA5 ZNF202 SP3 HCFC1 CEBPB ZNF398 GSC SCARNA13 SNHG10 DICER1 RPSAP4
GH14I094681 Enhancer 0.8 ENCODE 0.3 -44.7 -44683 0.2 ATF1 RAD21 RARA ELK1 ZNF143 FOS RCOR1 ATF7 CREM THAP11 LOC100288028 RPSAP4
GH14I094689 Enhancer 0.8 Ensembl 0.3 -36.3 -36271 1.1 ELF3 CTCF RB1 SIN3A ZIC2 ZNF48 RAD21 GLIS2 ZBTB48 PATZ1 GSC LOC100288028 RPSAP4
GH14I094748 Enhancer 0.7 ENCODE 0.3 +22.8 22767 0.2 CTCF PKNOX1 ZNF2 RAD21 HIC1 ZNF335 GATA3 SCRT2 ZNF143 SMC3 RPSAP4 GSC
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP4 Gene

Genomic Locations for RPSAP4 Gene
chr14:94,726,212-94,727,245
(GRCh38/hg38)
Size:
1,034 bases
Orientation:
Plus strand
chr14:95,192,549-95,193,582
(GRCh37/hg19)

Genomic View for RPSAP4 Gene

Genes around RPSAP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP4 Gene

Proteins for RPSAP4 Gene

Post-translational modifications for RPSAP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP4 Gene

Domains & Families for RPSAP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP4 Gene

Function for RPSAP4 Gene

Phenotypes From GWAS Catalog for RPSAP4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP4 Gene

Localization for RPSAP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP4 Gene

Pathways & Interactions for RPSAP4 Gene

SuperPathways for RPSAP4 Gene

No Data Available

Interacting Proteins for RPSAP4 Gene

Gene Ontology (GO) - Biological Process for RPSAP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP4 Gene

Drugs & Compounds for RPSAP4 Gene

No Compound Related Data Available

Transcripts for RPSAP4 Gene

mRNA/cDNA for RPSAP4 Gene

(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP4 Gene

No ASD Table

Relevant External Links for RPSAP4 Gene

GeneLoc Exon Structure for
RPSAP4
ECgene alternative splicing isoforms for
RPSAP4

Expression for RPSAP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP4 Gene:

RPSAP4
genes like me logo Genes that share expression patterns with RPSAP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP4 Gene

Orthologs for RPSAP4 Gene

Evolution for RPSAP4 Gene

ENSEMBL:
Gene Tree for RPSAP4 (if available)
TreeFam:
Gene Tree for RPSAP4 (if available)

No data available for Orthologs for RPSAP4 Gene

Paralogs for RPSAP4 Gene

No data available for Paralogs for RPSAP4 Gene

Variants for RPSAP4 Gene

Additional Variant Information for RPSAP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP4 Gene

Disorders for RPSAP4 Gene

No disorders were found for RPSAP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP4 Gene

Publications for RPSAP4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Sequence organization and matrix attachment regions of the human serine protease inhibitor gene cluster at 14q32.1. (PMID: 15014966) Namciu SJ … Fournier RE (Mammalian genome : official journal of the International Mammalian Genome Society 2004) 3 58

Products for RPSAP4 Gene

Sources for RPSAP4 Gene

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