Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPSAP36 Gene

Aliases for RPSAP36 Gene

  • Ribosomal Protein SA Pseudogene 36 2 3 5
  • RPSA_14_525 3

External Ids for RPSAP36 Gene

Previous GeneCards Identifiers for RPSAP36 Gene

  • GC04P144566
  • GC04P144346

Summaries for RPSAP36 Gene

GeneCards Summary for RPSAP36 Gene

RPSAP36 (Ribosomal Protein SA Pseudogene 36) is a Pseudogene.

Additional gene information for RPSAP36 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP36 Gene

Genomics for RPSAP36 Gene

GeneHancer (GH) Regulatory Elements for RPSAP36 Gene

Promoters and enhancers for RPSAP36 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I143854 Enhancer 0.9 ENCODE 4.1 +430.2 430230 1 PKNOX1 ARNT NCOA2 TCF12 ZNF766 ATF7 NCOA1 MEF2D GMEB1 SMARCA4 LOC100419356 LOC101927636 RPSAP36 LOC105377459 GYPE
GH04I143081 Enhancer 0.5 ENCODE 4.3 -340.5 -340506 5.5 CTCF SMC3 PRDM10 ATF7 ATF2 RAD21 USP38 RPSAP36 LOC101927636 PIR31196 LOC100287014 LOC105377623
GH04I143416 Enhancer 0.7 dbSUPER 0.8 -4.1 -4097 8.5 PKNOX1 BACH1 ZNF384 EBF1 BMI1 RELA ATF7 ZSCAN29 IKZF2 RUNX3 GAB1 LOC105377623 USP38 RPSAP36 RPS2P20
GH04I143410 Enhancer 1.2 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -12.9 -12930 2 STAT1 JUN CEBPB ZNF623 JUND PRDM6 PRDM10 ZXDB TRIM28 GAB1 RPSAP36 RPS2P20
GH04I143404 Enhancer 1.2 Ensembl ENCODE dbSUPER 0.4 -18.8 -18784 2.7 PKNOX1 FOXA2 SMAD1 NFIB MAX RAD21 YY1 POLR2A NFATC1 HNF4G GAB1 RPSAP36 RPS2P20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP36 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP36 Gene

Genomic Locations for RPSAP36 Gene
chr4:143,424,753-143,426,013
(GRCh38/hg38)
Size:
1,261 bases
Orientation:
Plus strand
chr4:144,345,906-144,347,166
(GRCh37/hg19)

Genomic View for RPSAP36 Gene

Genes around RPSAP36 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP36 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP36 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP36 Gene

Proteins for RPSAP36 Gene

Post-translational modifications for RPSAP36 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP36 Gene

Domains & Families for RPSAP36 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP36 Gene

Function for RPSAP36 Gene

Phenotypes From GWAS Catalog for RPSAP36 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP36 Gene

Localization for RPSAP36 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP36 Gene

Pathways & Interactions for RPSAP36 Gene

SuperPathways for RPSAP36 Gene

No Data Available

Interacting Proteins for RPSAP36 Gene

Gene Ontology (GO) - Biological Process for RPSAP36 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP36 Gene

Drugs & Compounds for RPSAP36 Gene

No Compound Related Data Available

Transcripts for RPSAP36 Gene

mRNA/cDNA for RPSAP36 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP36 Gene

No ASD Table

Relevant External Links for RPSAP36 Gene

GeneLoc Exon Structure for
RPSAP36
ECgene alternative splicing isoforms for
RPSAP36

Expression for RPSAP36 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP36 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP36 Gene:

RPSAP36
genes like me logo Genes that share expression patterns with RPSAP36: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP36 Gene

Orthologs for RPSAP36 Gene

Evolution for RPSAP36 Gene

ENSEMBL:
Gene Tree for RPSAP36 (if available)
TreeFam:
Gene Tree for RPSAP36 (if available)

No data available for Orthologs for RPSAP36 Gene

Paralogs for RPSAP36 Gene

No data available for Paralogs for RPSAP36 Gene

Variants for RPSAP36 Gene

Additional Variant Information for RPSAP36 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP36

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP36 Gene

Disorders for RPSAP36 Gene

Additional Disease Information for RPSAP36

No disorders were found for RPSAP36 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP36 Gene

Publications for RPSAP36 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPSAP36 Gene

Sources for RPSAP36 Gene

Content
Loading form....