Aliases for RPSAP20 Gene

Aliases for RPSAP20 Gene

  • Ribosomal Protein SA Pseudogene 20 2 3 5
  • RPSA_1_53 3
  • RPSAP20 5

External Ids for RPSAP20 Gene

Previous GeneCards Identifiers for RPSAP20 Gene

  • GC01M056445
  • GC01M056674

Summaries for RPSAP20 Gene

GeneCards Summary for RPSAP20 Gene

RPSAP20 (Ribosomal Protein SA Pseudogene 20) is a Pseudogene.

Additional gene information for RPSAP20 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPSAP20 Gene

Genomics for RPSAP20 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPSAP20 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPSAP20 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPSAP20 Gene

Latest Assembly
chr1:56,207,472-56,208,529
(GRCh38/hg38)
Size:
1,058 bases
Orientation:
Minus strand

Previous Assembly
chr1:56,673,144-56,674,201
(GRCh37/hg19 by Entrez Gene)
Size:
1,058 bases
Orientation:
Minus strand

chr1:56,673,239-56,674,128
(GRCh37/hg19 by Ensembl)
Size:
890 bases
Orientation:
Minus strand

Genomic View for RPSAP20 Gene

Genes around RPSAP20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP20 Gene

Proteins for RPSAP20 Gene

Post-translational modifications for RPSAP20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP20 Gene

Domains & Families for RPSAP20 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPSAP20 Gene

Function for RPSAP20 Gene

genes like me logo Genes that share phenotypes with RPSAP20: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP20 Gene

Localization for RPSAP20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP20 Gene

Pathways & Interactions for RPSAP20 Gene

PathCards logo

SuperPathways for RPSAP20 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPSAP20 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPSAP20 Gene

Drugs & Compounds for RPSAP20 Gene

No Compound Related Data Available

Transcripts for RPSAP20 Gene

mRNA/cDNA for RPSAP20 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP20 Gene

No ASD Table

Relevant External Links for RPSAP20 Gene

GeneLoc Exon Structure for
RPSAP20

Expression for RPSAP20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPSAP20 Gene

genes like me logo Genes that share expression patterns with RPSAP20: view

Primer products for research

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP20 Gene

Orthologs for RPSAP20 Gene

Evolution for RPSAP20 Gene

ENSEMBL:
Gene Tree for RPSAP20 (if available)
TreeFam:
Gene Tree for RPSAP20 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPSAP20

No data available for Orthologs for RPSAP20 Gene

Paralogs for RPSAP20 Gene

No data available for Paralogs for RPSAP20 Gene

Variants for RPSAP20 Gene

Additional Variant Information for RPSAP20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP20
Leiden Open Variation Database (LOVD)
RPSAP20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP20 Gene

Disorders for RPSAP20 Gene

No disorders were found for RPSAP20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP20 Gene

Publications for RPSAP20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association reveals genetic effects on human Aβ42 and τ protein levels in cerebrospinal fluids: a case control study. (PMID: 20932310) Han MR … Alzheimer's Disease Neuroimaging Initiative (BMC neurology 2010) 40

No data available for Mastermind for RPSAP20 Gene

Products for RPSAP20 Gene

Sources for RPSAP20 Gene