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RPSAP2 Gene(Pseudogene)

Ribosomal Protein SA Pseudogene 2

GCID:
GC06P028741
GIFtS:
10
Genes Participants
UDN Logo

Aliases for RPSAP2 Gene

Aliases for RPSAP2 Gene

  • Ribosomal Protein SA Pseudogene 2 2 3 5
  • Laminin Receptor 1 Pseudogene 2 2 3
  • RPSA_15_672 3
  • BA60E24.1 3
  • LAMR1P2 3

External Ids for RPSAP2 Gene

Previous HGNC Symbols for RPSAP2 Gene

  • LAMR1P2

Previous GeneCards Identifiers for RPSAP2 Gene

  • GC06U900801
  • GC06P028807
  • GC06P028700
  • GC06P028507
  • GC06P028701
  • GC06P028703
  • GC06P028705
  • GC06P028710
  • GC06P028733
  • GC06P028734
  • GC06P028735
  • GC06P028736
  • GC06P028737
  • GC06P028739
  • GC06P028740

Summaries for RPSAP2 Gene

GeneCards Summary for RPSAP2 Gene

RPSAP2 (Ribosomal Protein SA Pseudogene 2) is a Pseudogene.

Additional gene information for RPSAP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPSAP2 Gene

Genomics for RPSAP2 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for RPSAP2 Gene

Promoters and enhancers for RPSAP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06I028735 Enhancer 1.2 ENCODE dbSUPER 0.8 +3.4 3434 0.4 PKNOX1 ATF1 ARNT SIN3A ZNF2 NCOA2 GTF3C2 E2F8 ATF7 TSHZ1 GC06M028736 TRV-AAC6-1 TRIM27 ZSCAN12 ZSCAN23 ZKSCAN8 SUMO2P1 ZNF603P RPSAP2 GC06P028492
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPSAP2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP2 Gene

Genomic Locations for RPSAP2 Gene
chr6:28,731,939-28,732,974
(GRCh38/hg38)
Size:
1,036 bases
Orientation:
Plus strand
chr6:28,699,714-28,700,751
(GRCh37/hg19)

Genomic View for RPSAP2 Gene

Genes around RPSAP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPSAP2 Gene

Proteins for RPSAP2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPSAP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP2 Gene

Domains & Families for RPSAP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPSAP2 Gene

Function for RPSAP2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP2 Gene

Localization for RPSAP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP2 Gene

Pathways & Interactions for RPSAP2 Gene

SuperPathways for RPSAP2 Gene

PathCards logo More details on SuperPathways for RPSAP2
No Data Available

Interacting Proteins for RPSAP2 Gene

Gene Ontology (GO) - Biological Process for RPSAP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP2 Gene

Drugs & Compounds for RPSAP2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPSAP2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPSAP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP2 Gene

No ASD Table

Relevant External Links for RPSAP2 Gene

GeneLoc Exon Structure for
RPSAP2
ECgene alternative splicing isoforms for
RPSAP2

Expression for RPSAP2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP2 Gene

mRNA expression in normal human tissues for RPSAP2 Gene
mRNA expression by GTEx for RPSAP2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPSAP2 Gene:

RPSAP2
genes like me logo Genes that share expression patterns with RPSAP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP2 Gene

Orthologs for RPSAP2 Gene

Evolution for RPSAP2 Gene

ENSEMBL:
Gene Tree for RPSAP2 (if available)
TreeFam:
Gene Tree for RPSAP2 (if available)

No data available for Orthologs for RPSAP2 Gene

Paralogs for RPSAP2 Gene

No data available for Paralogs for RPSAP2 Gene

Variants for RPSAP2 Gene

Additional Variant Information for RPSAP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP2 Gene

Disorders for RPSAP2 Gene

Additional Disease Information for RPSAP2

Genetic Association Database
(GAD)

No disorders were found for RPSAP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP2 Gene

Publications for RPSAP2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPSAP2 Gene

Sources for RPSAP2 Gene

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