RPSAP2 Gene (Pseudogene)

Ribosomal Protein SA Pseudogene 2

GC06P028904
GIFtS:
7
See more...

Aliases for RPSAP2 Gene

Aliases for RPSAP2 Gene

  • Ribosomal Protein SA Pseudogene 2 2 3 5
  • Laminin Receptor 1 Pseudogene 2 2 3
  • BA60E24.1 2 3
  • RPSA_15_672 3
  • LAMR1P2 3
  • RPSAP2 5

External Ids for RPSAP2 Gene

Previous HGNC Symbols for RPSAP2 Gene

  • LAMR1P2

Previous GeneCards Identifiers for RPSAP2 Gene

  • GC06U900801
  • GC06P028807
  • GC06P028700
  • GC06P028507
  • GC06P028701
  • GC06P028703
  • GC06P028705
  • GC06P028710
  • GC06P028733
  • GC06P028734
  • GC06P028749
  • GC06P028748
  • GC06P028750
  • GC06P028753
  • GC06P028735
  • GC06P028736
  • GC06P028737
  • GC06P028739
  • GC06P028740
  • GC06P028741
  • GC06P028742
  • GC06P028744

Summaries for RPSAP2 Gene

GeneCards Summary for RPSAP2 Gene

RPSAP2 (Ribosomal Protein SA Pseudogene 2) is a Pseudogene.

Additional gene information for RPSAP2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPSAP2 Gene

Genomics for RPSAP2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPSAP2 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH06J028735 Enhancer 1.1 ENCODE dbSUPER 0.7 +3.4 3434 0.4 HNRNPL ZNF629 JUND ZSCAN4 PKNOX1 ZNF24 ZNF740 BRD9 ZNF501 HDAC1 TRV-AAC6-1 TRIM27 ZSCAN12 ZSCAN23 ZKSCAN8 SUMO2P1 ZNF603P RPSAP2 ZBED9
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPSAP2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPSAP2 Gene

Genomic Locations for RPSAP2 Gene
chr6:28,731,939-28,732,974
(GRCh38/hg38)
Size:
1,036 bases
Orientation:
Plus strand
chr6:28,699,714-28,700,751
(GRCh37/hg19)
Size:
1,038 bases
Orientation:
Plus strand

Genomic View for RPSAP2 Gene

Genes around RPSAP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP2 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPSAP2 Gene

Proteins for RPSAP2 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPSAP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP2 Gene

Domains & Families for RPSAP2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPSAP2 Gene

Function for RPSAP2 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for RPSAP2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP2 Gene

Localization for RPSAP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP2 Gene

Pathways & Interactions for RPSAP2 Gene

PathCards logo

SuperPathways for RPSAP2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPSAP2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPSAP2 Gene

Drugs & Compounds for RPSAP2 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPSAP2 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPSAP2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP2 Gene

No ASD Table

Relevant External Links for RPSAP2 Gene

GeneLoc Exon Structure for
RPSAP2

Expression for RPSAP2 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPSAP2 Gene

mRNA expression in normal human tissues for RPSAP2 Gene
mRNA expression by GTEx for RPSAP2 Gene
genes like me logo Genes that share expression patterns with RPSAP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP2 Gene

Orthologs for RPSAP2 Gene

Evolution for RPSAP2 Gene

ENSEMBL:
Gene Tree for RPSAP2 (if available)
TreeFam:
Gene Tree for RPSAP2 (if available)

No data available for Orthologs for RPSAP2 Gene

Paralogs for RPSAP2 Gene

No data available for Paralogs for RPSAP2 Gene

Variants for RPSAP2 Gene

Additional Variant Information for RPSAP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP2 Gene

Disorders for RPSAP2 Gene

Additional Disease Information for RPSAP2

Genetic Association Database
(GAD)

No disorders were found for RPSAP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPSAP2 Gene

Publications for RPSAP2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

ExternalLinks

View latest publications for RPSAP2 gene in Mastermind

Products for RPSAP2 Gene

Sources for RPSAP2 Gene