Aliases for RPSAP10 Gene

Aliases for RPSAP10 Gene

  • Ribosomal Protein SA Pseudogene 10 2 3 5
  • RPSA_22_1026 3
  • LAMR1P10 3

External Ids for RPSAP10 Gene

Previous GeneCards Identifiers for RPSAP10 Gene

  • GC10P028766

Summaries for RPSAP10 Gene

GeneCards Summary for RPSAP10 Gene

RPSAP10 (Ribosomal Protein SA Pseudogene 10) is a Pseudogene.

Additional gene information for RPSAP10 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPSAP10 Gene

Genomics for RPSAP10 Gene

GeneHancer (GH) Regulatory Elements for RPSAP10 Gene

Promoters and enhancers for RPSAP10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J028437 Enhancer 0.4 FANTOM5 Ensembl 750.6 +1.0 975 0.2 RPSAP10 ENSG00000222666 RF00100-017 RN7SKP39 lnc-MPP7-6 LINC02652
GH10J028838 Enhancer 1.1 Ensembl ENCODE 14.6 +403.1 403107 2.9 ZBTB40 ZBTB6 SMARCE1 NR2F6 CC2D1A DACH1 ZNF121 TEAD4 ZKSCAN8 RERE ENSG00000271220 LINC01517 LINC02652 RN7SKP39 RPSAP10 ZNF101P1 LINC00837 RNU6-270P RPL21P93 lnc-MPP7-8
GH10J028432 Enhancer 0.7 ENCODE 0.6 -3.7 -3749 0.2 CTCF ELF1 RAD21 ZNF652 ELF3 IKZF1 RXRA REST TRIM22 DEAF1 WAC WAC-AS1 RPSAP10 ENSG00000222666 lnc-MPP7-5
GH10J028411 Enhancer 1.3 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -24.3 -24325 1.6 CTCF SREBF1 ETV6 MAFK CREM ZBED1 IKZF1 CREB1 PRDM10 IKZF2 ENSG00000222666 lnc-MPP7-5 RPSAP10
GH10J028431 Enhancer 0.4 ENCODE 0.6 -4.8 -4839 0.2 CREB1 ATF7 ATF2 RPSAP10 ENSG00000222666 lnc-MPP7-5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPSAP10 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPSAP10 Gene

Genomic Locations for RPSAP10 Gene
chr10:28,436,126-28,437,151
(GRCh38/hg38)
Size:
1,026 bases
Orientation:
Plus strand
chr10:28,725,055-28,726,080
(GRCh37/hg19)
Size:
1,026 bases
Orientation:
Plus strand

Genomic View for RPSAP10 Gene

Genes around RPSAP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPSAP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPSAP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPSAP10 Gene

Proteins for RPSAP10 Gene

Post-translational modifications for RPSAP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPSAP10 Gene

Domains & Families for RPSAP10 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPSAP10 Gene

Function for RPSAP10 Gene

Phenotypes From GWAS Catalog for RPSAP10 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP10 Gene

Localization for RPSAP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP10 Gene

Pathways & Interactions for RPSAP10 Gene

PathCards logo

SuperPathways for RPSAP10 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPSAP10 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPSAP10 Gene

Drugs & Compounds for RPSAP10 Gene

No Compound Related Data Available

Transcripts for RPSAP10 Gene

mRNA/cDNA for RPSAP10 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPSAP10 Gene

No ASD Table

Relevant External Links for RPSAP10 Gene

GeneLoc Exon Structure for
RPSAP10
ECgene alternative splicing isoforms for
RPSAP10

Expression for RPSAP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPSAP10 Gene

mRNA differential expression in normal tissues according to GTEx for RPSAP10 Gene

This gene is overexpressed in Testis (x36.9).

NURSA nuclear receptor signaling pathways regulating expression of RPSAP10 Gene:

RPSAP10
genes like me logo Genes that share expression patterns with RPSAP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP10 Gene

Orthologs for RPSAP10 Gene

Evolution for RPSAP10 Gene

ENSEMBL:
Gene Tree for RPSAP10 (if available)
TreeFam:
Gene Tree for RPSAP10 (if available)

No data available for Orthologs for RPSAP10 Gene

Paralogs for RPSAP10 Gene

No data available for Paralogs for RPSAP10 Gene

Variants for RPSAP10 Gene

Additional Variant Information for RPSAP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPSAP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP10 Gene

Disorders for RPSAP10 Gene

No disorders were found for RPSAP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP10 Gene

Publications for RPSAP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 56
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 56

Products for RPSAP10 Gene

Sources for RPSAP10 Gene