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Aliases for RPSAP10 Gene
External Ids for RPSAP10 Gene
- HGNC: 31460
- Entrez Gene: 401638
- Ensembl: ENSG00000224439
Previous GeneCards Identifiers for RPSAP10 Gene
- GC10P028766
Summaries for RPSAP10 Gene
GeneCards Summary for RPSAP10 Gene
RPSAP10 (Ribosomal Protein SA Pseudogene 10) is a Pseudogene.
Additional gene information for RPSAP10 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPSAP10 Gene
Genomics for RPSAP10 Gene
GeneHancer (GH) Regulatory Elements for RPSAP10 Gene
Promoters and enhancers for RPSAP10 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH10J028437 | Enhancer | 0.4 | FANTOM5 Ensembl | 750.6 | +1.0 | 975 | 0.2 | RPSAP10 ENSG00000222666 RF00100-017 RN7SKP39 lnc-MPP7-6 LINC02652 | ||
| GH10J028838 | Enhancer | 1.1 | Ensembl ENCODE | 14.6 | +403.1 | 403107 | 2.9 | ZBTB40 ZBTB6 SMARCE1 NR2F6 CC2D1A DACH1 ZNF121 TEAD4 ZKSCAN8 RERE | ENSG00000271220 LINC01517 LINC02652 RN7SKP39 RPSAP10 ZNF101P1 LINC00837 RNU6-270P RPL21P93 lnc-MPP7-8 | |
| GH10J028432 | Enhancer | 0.7 | ENCODE | 0.6 | -3.7 | -3749 | 0.2 | CTCF ELF1 RAD21 ZNF652 ELF3 IKZF1 RXRA REST TRIM22 DEAF1 | WAC WAC-AS1 RPSAP10 ENSG00000222666 lnc-MPP7-5 | |
| GH10J028411 | Enhancer | 1.3 | FANTOM5 Ensembl ENCODE dbSUPER | 0.3 | -24.3 | -24325 | 1.6 | CTCF SREBF1 ETV6 MAFK CREM ZBED1 IKZF1 CREB1 PRDM10 IKZF2 | ENSG00000222666 lnc-MPP7-5 RPSAP10 | |
| GH10J028431 | Enhancer | 0.4 | ENCODE | 0.6 | -4.8 | -4839 | 0.2 | CREB1 ATF7 ATF2 | RPSAP10 ENSG00000222666 lnc-MPP7-5 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPSAP10 on UCSC Golden Path with GeneCards custom track
Genomic Locations for RPSAP10 Gene
Genomic Locations for RPSAP10 Gene
- chr10:28,436,126-28,437,151
- (GRCh38/hg38)
- Size:
- 1,026 bases
- Orientation:
- Plus strand
- chr10:28,725,055-28,726,080
- (GRCh37/hg19)
- Size:
- 1,026 bases
- Orientation:
- Plus strand
Genomic View for RPSAP10 Gene
Genes around RPSAP10 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 10p12.1 by HGNC
- 10p12.1 by Entrez Gene
- 10p12.1 by Ensembl
RPSAP10 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPSAP10 Gene
Proteins for RPSAP10 Gene
Post-translational modifications for RPSAP10 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPSAP10
- Origene Custom Protein Services for RPSAP10
No data available for DME Specific Peptides for RPSAP10 Gene
Domains & Families for RPSAP10 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPSAP10 Gene
Function for RPSAP10 Gene
Phenotypes From GWAS Catalog for RPSAP10 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Browse CRISPR knockouts for RPSAP10
- Applied Biological Materials (abm): CRISPR Clones for RPSAP10 - Select products 50% OFF >
- * RPSAP10 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * RPSAP10 CRISPR applications: KO, Activation, Repression, and more - Browse All
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPSAP10 Gene
Localization for RPSAP10 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPSAP10 Gene
Transcripts for RPSAP10 Gene
mRNA/cDNA for RPSAP10 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000426103 878 bps (ENST00000426103.1)
CRISPR Products
- Browse CRISPR knockouts for RPSAP10
- Applied Biological Materials (abm): CRISPR Clones for RPSAP10 - Select products 50% OFF >
- * RPSAP10 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * RPSAP10 CRISPR applications: KO, Activation, Repression, and more - Browse All
miRNA Products
Inhibitory RNA Products
Clone Products
Expression for RPSAP10 Gene
mRNA differential expression in normal tissues according to GTEx for RPSAP10 Gene
This gene is overexpressed in Testis (x36.9).
NURSA nuclear receptor signaling pathways regulating expression of RPSAP10 Gene:
RPSAP10
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPSAP10 Gene
Orthologs for RPSAP10 Gene
No data available for Orthologs for RPSAP10 Gene
Paralogs for RPSAP10 Gene
No data available for Paralogs for RPSAP10 Gene
Variants for RPSAP10 Gene
Additional Variant Information for RPSAP10 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPSAP10
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPSAP10 Gene
Disorders for RPSAP10 Gene
No disorders were found for RPSAP10 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPSAP10 Gene
Publications for RPSAP10 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 56
- Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 56
ExternalLinks
Products for RPSAP10 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPSAP10
- Origene Custom Protein Services for RPSAP10
- Browse OriGene Inhibitory RNA Products For RPSAP10
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPSAP10
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPSAP10
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPSAP10
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPSAP10
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPSAP10
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPSAP10
Sources for RPSAP10 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) CGAP SAGE
- (31) SOURCE
- (32) HomoloGene
- (33) PanEnsembl
- (34) euGenes
- (35) SGD
- (36) FlyBase
- (37) WormBase
- (38) Pseudogene
- (39) DGV
- (40) dbSNP
- (41) GenAtlas
- (42) HGMD
- (43) GAD
- (44) BGMUT
- (45) HuGE
- (46) Atlas
- (47) GenBank
- (48) H-invDB
- (49) HORDE
- (50) HUGE
- (51) IMGT
- (52) Leiden
- (53) miRBase
- (54) DME
- (55) OriGene
- (56) PubMed
- (57) R&D Systems
- (58) TGDB
- (59) Tocris
- (60) Abcam
- (61) Novus Biologicals
- (62) ProSpec
- (63) Sino Biological
- (64) GenScript
- (65) Qiagen
- (66) OCA
- (67) Proteopedia
- (68) MOPED
- (69) neXtProt
- (70) Reactome
- (71) GeneGo (Thomson Reuters)
- (72) DISEASES
- (73) SIMAP
- (74) GenomeRNAi
- (75) LifeMap
- (76) miRTarBase
- (77) MalaCards
- (78) Invitrogen
- (79) BitterDB
- (80) ESI-BIO
- (81) RefSeq
- (82) BioSystems
- (83) MaxQB
- (84) IUPHAR
- (85) BioGPS
- (86) Illumina
- (87) COMPARTMENTS
- (88) HOMER
- (89) PaxDb
- (90) ApexBio
- (91) Addgene
- (92) antibodies-online
- (93) CYP
- (94) NONCODE
- (95) TreeFam
- (96) PathCards
- (97) GeneReviews
- (98) GeneTex
- (99) Taconic Biosciences
- (100) GTEx
- (101) ProteomicsDB
- (102) SCBT
- (103) DGIdb
- (104) ClinicalTrials
- (105) RVIS
- (106) SIGNOR
- (107) diseasecard
- (108) NIH Rare Diseases
- (109) Orphanet
- (110) UMLS
- (111) GTR
- (112) Disease Ontology
- (113) Genetics Home Reference
- (114) MeSH
- (115) MedlinePlus
- (116) CDC
- (117) NINDS
- (118) NCBI Bookshelf
- (119) ClinVar
- (120) Gene Damage Index
- (121) HPO
- (122) UDN
- (123) VISTA
- (124) FANTOM5
- (125) ENCODE
- (126) ProSci
- (127) Horizon
- (128) NURSA
- (129) IID
- (130) VectorBuilder
- (131) SNPedia
- (132) BRCA Exchange
- (133) CIViC
- (134) ProteoGenix
- (135) dbSUPER
- (136) TISSUES
- (137) Gene ORGANizer
- (138) abm
- (139) Human Protein Atlas
- (140) GWAS Catalog
- (141) Monarch Initiative
- (142) DataMed
- (143) HumanCyc
- (144) genomics-online
- (145) UCNEbase
- (146) EPDnew
- (147) Applied Biosystems
- (148) GlyConnect
- (149) Aminode
- (150) GeneCopoeia
- (151) GPS-Prot
- (152) RNACentral
- (153) LncRNADisease
- (154) LOVD
- (155) miR2Disease
- (156) DiseaseEnhancer
- (157) Boster Bio
- (158) Biorbyt
- (159) Biocompare
- (160) Mastermind
- (161) CTD^2 Dashboard
- (162) CraniofacialAtlas
- (163) GeneImprint
- (164) Synthego
- (165) Bio Basic
- (166) ENA
- (167) GtRNAdb
- (168) LncBase
- (169) LncBook
- (170) LNCipedia
- (171) LncRNAdb
- (172) Modomics
- (173) PDBe
- (174) Rfam
- (175) SILVA
- (176) snOPY
- (177) SRPDB
- (178) GENCODE
- (179) TarBase
- (180) MyBioSource