Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS9P4 Gene

Aliases for RPS9P4 Gene

  • Ribosomal Protein S9 Pseudogene 4 2 3
  • RPS9_1_1662 3

External Ids for RPS9P4 Gene

Previous GeneCards Identifiers for RPS9P4 Gene

  • GC19M054917
  • GC19M050224

Summaries for RPS9P4 Gene

GeneCards Summary for RPS9P4 Gene

RPS9P4 (Ribosomal Protein S9 Pseudogene 4) is a Pseudogene.

Additional gene information for RPS9P4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS9P4 Gene

Genomics for RPS9P4 Gene

GeneHancer (GH) Regulatory Elements for RPS9P4 Gene

Promoters and enhancers for RPS9P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J049716 Promoter/Enhancer 1.5 Ensembl ENCODE 600.7 +1.8 1808 4.1 SP1 ELF3 CTCF GTF2F1 CSDE1 MAFK TRIM24 SP7 ELF1 ZNF639 ENSG00000243829 RPS9P4 POLD1 SNORD35A PTOV1-AS2 IRF3 SNORD35B ALDH16A1 NUP62 PIH1D1
GH19J049724 Enhancer 0.8 Ensembl ENCODE 0.7 -4.3 -4297 0.7 PRDM1 PRDM10 ZNF692 CEBPB SCRT2 JUN JUND FOS SCRT1 EP300 RPS9P4 LOC105372434
GH19J049726 Enhancer 1.2 FANTOM5 Ensembl ENCODE 0.4 -7.7 -7666 2 CC2D1A MLLT1 SMARCA4 IKZF1 REST MTA2 NKRF MGA ZNF184 POLR2A RPS9P4 LOC105372434
GH19J049746 Enhancer 0.8 ENCODE 0.3 -26.2 -26232 0.3 HDGF SP1 CC2D1A ZFX MLLT1 KLF14 EGR1 DPF2 IKZF1 ATF1 SNRNP70 ENSG00000268047 PRR12 ADM5 CPT1C PRMT1 PTOV1-AS2 NUP62 PIH1D1 CLEC11A
GH19J049741 Enhancer 0.6 Ensembl 0.3 -21.6 -21564 1.4 CEBPG CEBPA CEBPB FOXA2 FOSL1 MYC ELF1 HLF ADM5 CPT1C PRMT1 RNU6-841P TSKS AP2A1 RRAS SCAF1 SLC17A7 LOC105372434
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS9P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS9P4 Gene

Genomic Locations for RPS9P4 Gene
chr19:49,719,426-49,720,137
(GRCh38/hg38)
Size:
712 bases
Orientation:
Minus strand
chr19:50,222,683-50,223,394
(GRCh37/hg19)
Size:
712 bases
Orientation:
Minus strand

Genomic View for RPS9P4 Gene

Genes around RPS9P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS9P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS9P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS9P4 Gene

Proteins for RPS9P4 Gene

Post-translational modifications for RPS9P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS9P4 Gene

Domains & Families for RPS9P4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS9P4 Gene

Function for RPS9P4 Gene

Phenotypes From GWAS Catalog for RPS9P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS9P4 Gene

Localization for RPS9P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS9P4 Gene

Pathways & Interactions for RPS9P4 Gene

PathCards logo

SuperPathways for RPS9P4 Gene

No Data Available

Interacting Proteins for RPS9P4 Gene

Gene Ontology (GO) - Biological Process for RPS9P4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS9P4 Gene

Drugs & Compounds for RPS9P4 Gene

No Compound Related Data Available

Transcripts for RPS9P4 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS9P4 Gene

No ASD Table

Relevant External Links for RPS9P4 Gene

GeneLoc Exon Structure for
RPS9P4
ECgene alternative splicing isoforms for
RPS9P4

Expression for RPS9P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS9P4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS9P4 Gene:

RPS9P4
genes like me logo Genes that share expression patterns with RPS9P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS9P4 Gene

Orthologs for RPS9P4 Gene

No data available for Orthologs and Evolution for RPS9P4 Gene

Paralogs for RPS9P4 Gene

No data available for Paralogs for RPS9P4 Gene

Variants for RPS9P4 Gene

Additional Variant Information for RPS9P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS9P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS9P4 Gene

Disorders for RPS9P4 Gene

Additional Disease Information for RPS9P4

Genetic Association Database
(GAD)

No disorders were found for RPS9P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS9P4 Gene

Publications for RPS9P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association study of panic disorder in the Japanese population. (PMID: 19165232) Otowa T … Okazaki Y (Journal of human genetics 2009) 3 45 58

No data available for External Links for RPS9P4 Gene

Products for RPS9P4 Gene

Sources for RPS9P4 Gene

Content
Loading form....