Aliases for RPS7P4 Gene

Aliases for RPS7P4 Gene

  • Ribosomal Protein S7 Pseudogene 4 2 3 5
  • RPS7_1_61 3
  • RPS7P4 5

External Ids for RPS7P4 Gene

Previous GeneCards Identifiers for RPS7P4 Gene

  • GC01M068482
  • GC01M068709

Summaries for RPS7P4 Gene

GeneCards Summary for RPS7P4 Gene

RPS7P4 (Ribosomal Protein S7 Pseudogene 4) is a Pseudogene.

Additional gene information for RPS7P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS7P4 Gene

Genomics for RPS7P4 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS7P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J068253 Enhancer 0.5 Ensembl 0.4 -12.7 -12702 3.6 CEBPB NFE2 USF1 EP300 CEBPG HLF WLS MIR1262 RPS7P4 lnc-GADD45A-8 RPE65
GH01J068245 Enhancer 0.2 Ensembl 0.7 -2.3 -2302 0.4 MIR1262 RPS7P4 WLS lnc-GADD45A-8 RPE65
GH01J068246 Enhancer 0.2 Ensembl 0.7 -2.8 -2802 0.2 MIR1262 RPS7P4 WLS lnc-GADD45A-8 RPE65
GH01J068260 Enhancer 0.2 Ensembl 0.4 -17.6 -17601 1.4 WLS MIR1262 RPE65 lnc-GADD45A-8 RPS7P4
GH01J068264 Enhancer 0.2 Ensembl 0.4 -21.8 -21802 0.6 RPE65 WLS lnc-GADD45A-8 RPS7P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS7P4 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS7P4 Gene

Genomic Locations for RPS7P4 Gene
chr1:68,242,433-68,243,099
(GRCh38/hg38)
Size:
667 bases
Orientation:
Minus strand
chr1:68,708,112-68,708,782
(GRCh37/hg19)
Size:
671 bases
Orientation:
Minus strand

Genomic View for RPS7P4 Gene

Genes around RPS7P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS7P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS7P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS7P4 Gene

Proteins for RPS7P4 Gene

Post-translational modifications for RPS7P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS7P4 Gene

Domains & Families for RPS7P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS7P4 Gene

Function for RPS7P4 Gene

Phenotypes From GWAS Catalog for RPS7P4 Gene

Phenotypes for RPS7P4 Gene

GenomeRNAi human phenotypes for RPS7P4:
genes like me logo Genes that share phenotypes with RPS7P4: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS7P4 Gene

Localization for RPS7P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS7P4 Gene

Pathways & Interactions for RPS7P4 Gene

PathCards logo

SuperPathways for RPS7P4 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS7P4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS7P4 Gene

Drugs & Compounds for RPS7P4 Gene

No Compound Related Data Available

Transcripts for RPS7P4 Gene

mRNA/cDNA for RPS7P4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS7P4 Gene

No ASD Table

Relevant External Links for RPS7P4 Gene

GeneLoc Exon Structure for
RPS7P4

Expression for RPS7P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS7P4 Gene

genes like me logo Genes that share expression patterns with RPS7P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS7P4 Gene

Orthologs for RPS7P4 Gene

Evolution for RPS7P4 Gene

ENSEMBL:
Gene Tree for RPS7P4 (if available)
TreeFam:
Gene Tree for RPS7P4 (if available)

No data available for Orthologs for RPS7P4 Gene

Paralogs for RPS7P4 Gene

No data available for Paralogs for RPS7P4 Gene

Variants for RPS7P4 Gene

Additional Variant Information for RPS7P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS7P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS7P4 Gene

Disorders for RPS7P4 Gene

Additional Disease Information for RPS7P4

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for RPS7P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS7P4 Gene

Publications for RPS7P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry. (PMID: 24332808) Maréchal A … Zou L (Molecular cell 2014) 3
  3. LGALS3BP regulates centriole biogenesis and centrosome hypertrophy in cancer cells. (PMID: 23443559) Fogeron ML … Lange BM (Nature communications 2013) 3
  4. Dynamics of cullin-RING ubiquitin ligase network revealed by systematic quantitative proteomics. (PMID: 21145461) Bennett EJ … Harper JW (Cell 2010) 3
  5. Replication of previous genome-wide association studies of bone mineral density in premenopausal American women. (PMID: 20200978) Ichikawa S … Econs MJ (Journal of bone and mineral research : the official journal of the American Society for Bone and Mineral Research 2010) 3

Products for RPS7P4 Gene

Sources for RPS7P4 Gene