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Aliases for RPS6P25 Gene

Aliases for RPS6P25 Gene

  • Ribosomal Protein S6 Pseudogene 25 2 3 5
  • RPS6_13_1629 3

External Ids for RPS6P25 Gene

Previous GeneCards Identifiers for RPS6P25 Gene

  • GC19P012866
  • GC19P013005

Summaries for RPS6P25 Gene

GeneCards Summary for RPS6P25 Gene

RPS6P25 (Ribosomal Protein S6 Pseudogene 25) is a Pseudogene.

Additional gene information for RPS6P25 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6P25 Gene

Genomics for RPS6P25 Gene

GeneHancer (GH) Regulatory Elements for RPS6P25 Gene

Promoters and enhancers for RPS6P25 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J012894 Enhancer 0.3 Ensembl 600.7 +0.1 107 0.4 HNF4A RPS6P25 GCDH SYCE2
GH19J012936 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 44.8 +45.0 45038 5.8 MTA3 ZNF652 SP1 CC2D1A ZFX MNT CBFA2T2 NKRF POLR2A MLLT1 CALR MIR6515 ZNF625 ZNF136 TRMT1 RPS6P25 ZNF844 ZNF442 ZNF788P CCDC130
GH19J013115 Promoter/Enhancer 2.6 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 30.9 +224.8 224842 7.7 MTA3 ZFX SP1 CC2D1A ELF3 ZKSCAN8 MNT SIX5 CBFA2T2 ZNF148 TRMT1 NACC1 ZNF791 ZNF136 CCDC130 MRI1 WDR83OS ZNF44 ZNF442 ZNF564
GH19J012781 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 27.8 -104.8 -104796 16 MTA3 ZNF652 SP1 ZFX CC2D1A ELF3 CTCF MNT SIX5 CBFA2T2 IER2 CCDC130 ZNF136 ZNF44 ZNF791 ZNF564 TRMT1 WDR83OS ZNF442 MRI1
GH19J013148 Promoter/Enhancer 2.7 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 27.7 +259.3 259298 10.8 MTA3 ZNF652 SP1 ZFX CC2D1A ELF3 MNT SIX5 ZNF148 NKRF STX10 ENSG00000267598 IER2 CCDC130 ZNF136 TRMT1 ZNF44 ZNF564 WDR83OS RFX1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS6P25 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS6P25 Gene

Genomic Locations for RPS6P25 Gene
chr19:12,894,094-12,894,911
(GRCh38/hg38)
Size:
818 bases
Orientation:
Plus strand
chr19:13,004,908-13,005,725
(GRCh37/hg19)
Size:
818 bases
Orientation:
Plus strand

Genomic View for RPS6P25 Gene

Genes around RPS6P25 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P25 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P25 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P25 Gene

Proteins for RPS6P25 Gene

Post-translational modifications for RPS6P25 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P25 Gene

Domains & Families for RPS6P25 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6P25 Gene

Function for RPS6P25 Gene

Phenotypes From GWAS Catalog for RPS6P25 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P25 Gene

Localization for RPS6P25 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS6P25 Gene

Pathways & Interactions for RPS6P25 Gene

PathCards logo

SuperPathways for RPS6P25 Gene

No Data Available

Interacting Proteins for RPS6P25 Gene

Gene Ontology (GO) - Biological Process for RPS6P25 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS6P25 Gene

Drugs & Compounds for RPS6P25 Gene

No Compound Related Data Available

Transcripts for RPS6P25 Gene

mRNA/cDNA for RPS6P25 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P25 Gene

No ASD Table

Relevant External Links for RPS6P25 Gene

GeneLoc Exon Structure for
RPS6P25
ECgene alternative splicing isoforms for
RPS6P25

Expression for RPS6P25 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6P25 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS6P25 Gene:

RPS6P25
genes like me logo Genes that share expression patterns with RPS6P25: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P25 Gene

Orthologs for RPS6P25 Gene

Evolution for RPS6P25 Gene

ENSEMBL:
Gene Tree for RPS6P25 (if available)
TreeFam:
Gene Tree for RPS6P25 (if available)

No data available for Orthologs for RPS6P25 Gene

Paralogs for RPS6P25 Gene

No data available for Paralogs for RPS6P25 Gene

Variants for RPS6P25 Gene

Additional Variant Information for RPS6P25 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P25

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P25 Gene

Disorders for RPS6P25 Gene

No disorders were found for RPS6P25 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS6P25 Gene

Publications for RPS6P25 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS6P25 Gene

Sources for RPS6P25 Gene

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