RPS6P22 Gene (Pseudogene)

Ribosomal Protein S6 Pseudogene 22

GC12P059020
GIFtS:
6
See more...

Aliases for RPS6P22 Gene

Aliases for RPS6P22 Gene

  • Ribosomal Protein S6 Pseudogene 22 2 3 5
  • RPS6_10_1242 3
  • RPS6P22 5

External Ids for RPS6P22 Gene

Previous GeneCards Identifiers for RPS6P22 Gene

  • GC12P057702
  • GC12P059414

Summaries for RPS6P22 Gene

GeneCards Summary for RPS6P22 Gene

RPS6P22 (Ribosomal Protein S6 Pseudogene 22) is a Pseudogene.

Additional gene information for RPS6P22 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS6P22 Gene

Genomics for RPS6P22 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPS6P22 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH12J059018 Enhancer 0.3 CraniofacialAtlas 600.7 -1.2 -1224 0.6 SMARCA4 RPS6P22 lnc-SLC16A7-7 LRIG3 piR-37026-126 LOC105369791 ENSG00000257443 SLC16A7
GH12J059004 Enhancer 0.6 ENCODE CraniofacialAtlas 0.4 -14.5 -14493 2.3 ZNF316 MAFF MAFK MAFG SMARCA4 EMSY LRIG3 RPS6P22 piR-37026-126 ENSG00000257443 LOC105369791 SLC16A7
GH12J059009 Enhancer 0.2 ENCODE 0.4 -9.8 -9833 0.7 RPS6P22 piR-37026-126 ENSG00000257443 LOC105369791 LRIG3 SLC16A7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS6P22 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS6P22 Gene

Genomic Locations for RPS6P22 Gene
chr12:59,020,144-59,020,925
(GRCh38/hg38)
Size:
782 bases
Orientation:
Plus strand
chr12:59,413,925-59,414,706
(GRCh37/hg19)
Size:
782 bases
Orientation:
Plus strand

Genomic View for RPS6P22 Gene

Genes around RPS6P22 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P22 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P22 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS6P22 Gene

Proteins for RPS6P22 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS6P22 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P22 Gene

Domains & Families for RPS6P22 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS6P22 Gene

Function for RPS6P22 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P22 Gene

Localization for RPS6P22 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS6P22 Gene

Pathways & Interactions for RPS6P22 Gene

PathCards logo

SuperPathways for RPS6P22 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS6P22 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS6P22 Gene

Drugs & Compounds for RPS6P22 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS6P22 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS6P22 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P22 Gene

No ASD Table

Relevant External Links for RPS6P22 Gene

GeneLoc Exon Structure for
RPS6P22

Expression for RPS6P22 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS6P22 Gene

mRNA expression in normal human tissues for RPS6P22 Gene
mRNA expression by GTEx for RPS6P22 Gene
genes like me logo Genes that share expression patterns with RPS6P22: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P22 Gene

Orthologs for RPS6P22 Gene

Evolution for RPS6P22 Gene

ENSEMBL:
Gene Tree for RPS6P22 (if available)
TreeFam:
Gene Tree for RPS6P22 (if available)

No data available for Orthologs for RPS6P22 Gene

Paralogs for RPS6P22 Gene

No data available for Paralogs for RPS6P22 Gene

Variants for RPS6P22 Gene

Additional Variant Information for RPS6P22 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P22

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P22 Gene

Disorders for RPS6P22 Gene

Additional Disease Information for RPS6P22

Genetic Association Database
(GAD)

No disorders were found for RPS6P22 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6P22 Gene

Publications for RPS6P22 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association study of temperament in bipolar disorder reveals significant associations with three novel Loci. (PMID: 22365631) Greenwood TA … Kelsoe JR (Biological psychiatry 2012) 41
  3. Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 41
  4. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41

No data available for Mastermind for RPS6P22 Gene

Products for RPS6P22 Gene

Sources for RPS6P22 Gene