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Aliases for RPS6P18 Gene

Aliases for RPS6P18 Gene

  • Ribosomal Protein S6 Pseudogene 18 2 3
  • RPS6_8_1191 3

External Ids for RPS6P18 Gene

Previous GeneCards Identifiers for RPS6P18 Gene

  • GC12U901103
  • GC12P002771
  • GC12P002772

Summaries for RPS6P18 Gene

GeneCards Summary for RPS6P18 Gene

RPS6P18 (Ribosomal Protein S6 Pseudogene 18) is a Pseudogene.

Additional gene information for RPS6P18 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS6P18 Gene

Genomics for RPS6P18 Gene

GeneHancer (GH) Regulatory Elements for RPS6P18 Gene

Promoters and enhancers for RPS6P18 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J002639 Enhancer 0.9 Ensembl ENCODE 0.4 -18.4 -18394 4.2 CTCF PRDM1 EGR1 FOSL2 POLR2A ZIC2 SMARCC1 SOX6 JUND PKNOX1 CACNA1C-AS3 CACNA1C RPS6P18
GH12J002615 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 -43.5 -43494 2.4 GLIS2 ZIC2 ZNF629 OSR2 ATF2 FOS POLR2A NR2F2 ZFHX2 ZNF660 CACNA1C-AS3 RPS6P18 CACNA1C
GH12J002624 Enhancer 0.9 Ensembl ENCODE 0.3 -33.5 -33495 4.5 MAFK FOSL2 ZNF316 CTCF MAFG FOSL1 POLR2A ZNF217 DPF2 CUX1 FKBP4 CBX3P4 ITFG2 CACNA1C-AS3 RPS6P18 CACNA1C
GH12J002631 Enhancer 0.7 Ensembl ENCODE 0.3 -28.2 -28194 2.6 RXRA SP1 NR2F2 MAX REST CACNA1C-AS3 RPS6P18 CACNA1C
GH12J002612 Enhancer 0.8 Ensembl ENCODE 0.3 -46.2 -46155 2.3 POLR2A ZNF600 ZIC2 ZEB2 ZNF629 TSHZ1 ZBTB17 FOS FOSL2 BATF CACNA1C-AS3 RPS6P18 CACNA1C
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS6P18 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS6P18 Gene

Genomic Locations for RPS6P18 Gene
chr12:2,659,895-2,660,546
(GRCh38/hg38)
Size:
652 bases
Orientation:
Plus strand
chr12:2,769,103-2,770,135
(GRCh37/hg19)
Size:
1,033 bases
Orientation:
Plus strand

Genomic View for RPS6P18 Gene

Genes around RPS6P18 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P18 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P18 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P18 Gene

Proteins for RPS6P18 Gene

Post-translational modifications for RPS6P18 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P18 Gene

Domains & Families for RPS6P18 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS6P18 Gene

Function for RPS6P18 Gene

Phenotypes From GWAS Catalog for RPS6P18 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P18 Gene

Localization for RPS6P18 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS6P18 Gene

Pathways & Interactions for RPS6P18 Gene

PathCards logo

SuperPathways for RPS6P18 Gene

No Data Available

Interacting Proteins for RPS6P18 Gene

Gene Ontology (GO) - Biological Process for RPS6P18 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS6P18 Gene

Drugs & Compounds for RPS6P18 Gene

No Compound Related Data Available

Transcripts for RPS6P18 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P18 Gene

No ASD Table

Relevant External Links for RPS6P18 Gene

GeneLoc Exon Structure for
RPS6P18
ECgene alternative splicing isoforms for
RPS6P18

No data available for mRNA/cDNA for RPS6P18 Gene

Expression for RPS6P18 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS6P18 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS6P18 Gene:

RPS6P18
genes like me logo Genes that share expression patterns with RPS6P18: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P18 Gene

Orthologs for RPS6P18 Gene

No data available for Orthologs and Evolution for RPS6P18 Gene

Paralogs for RPS6P18 Gene

No data available for Paralogs for RPS6P18 Gene

Variants for RPS6P18 Gene

Additional Variant Information for RPS6P18 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P18

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P18 Gene

Disorders for RPS6P18 Gene

Additional Disease Information for RPS6P18

Genetic Association Database
(GAD)

No disorders were found for RPS6P18 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6P18 Gene

Publications for RPS6P18 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association studies in an isolated founder population from the Pacific Island of Kosrae. (PMID: 19197348) Lowe JK … Friedman JM (PLoS genetics 2009) 45 58

No data available for External Links for RPS6P18 Gene

Products for RPS6P18 Gene

Sources for RPS6P18 Gene

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