Aliases for RPS6P15 Gene

Aliases for RPS6P15 Gene

  • Ribosomal Protein S6 Pseudogene 15 2 3 5
  • RPS6_7_1097 3
  • RPS6P15 5

External Ids for RPS6P15 Gene

Previous GeneCards Identifiers for RPS6P15 Gene

  • GC10M113249

Summaries for RPS6P15 Gene

GeneCards Summary for RPS6P15 Gene

RPS6P15 (Ribosomal Protein S6 Pseudogene 15) is a Pseudogene.

Additional gene information for RPS6P15 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS6P15 Gene

Genomics for RPS6P15 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS6P15 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J111506 Enhancer 0.5 Ensembl ENCODE 0.4 -8.4 -8411 2.1 USF1 SP1 RPS6P15 lnc-BBIP1-9 piR-60334-001 ADRA2A GPAM
GH10J111556 Enhancer 0.4 Ensembl 0.2 -58.1 -58060 0.4 SP1 NR2F2 HNF4A RXRA piR-60334-001 RPS6P15 lnc-BBIP1-9 ADRA2A GPAM
GH10J111563 Enhancer 0.2 Ensembl 0.2 -64.8 -64760 0.2 piR-60334-001 RPS6P15 lnc-BBIP1-9 ADRA2A GPAM
GH10J111561 Enhancer 0.2 Ensembl 0.2 -63.3 -63260 0.8 piR-60334-001 RPS6P15 lnc-BBIP1-9 ADRA2A GPAM
GH10J111566 Enhancer 0.2 Ensembl 0.2 -67.4 -67360 0.2 piR-60334-001 RPS6P15 lnc-BBIP1-9 ADRA2A GPAM
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS6P15 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS6P15 Gene

Genomic Locations for RPS6P15 Gene
chr10:111,498,176-111,498,941
(GRCh38/hg38)
Size:
766 bases
Orientation:
Minus strand
chr10:113,257,934-113,258,699
(GRCh37/hg19)
Size:
766 bases
Orientation:
Minus strand

Genomic View for RPS6P15 Gene

Genes around RPS6P15 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS6P15 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS6P15 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS6P15 Gene

Proteins for RPS6P15 Gene

Post-translational modifications for RPS6P15 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS6P15 Gene

Domains & Families for RPS6P15 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS6P15 Gene

Function for RPS6P15 Gene

Phenotypes From GWAS Catalog for RPS6P15 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS6P15 Gene

Localization for RPS6P15 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS6P15 Gene

Pathways & Interactions for RPS6P15 Gene

PathCards logo

SuperPathways for RPS6P15 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS6P15 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS6P15 Gene

Drugs & Compounds for RPS6P15 Gene

No Compound Related Data Available

Transcripts for RPS6P15 Gene

mRNA/cDNA for RPS6P15 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS6P15 Gene

No ASD Table

Relevant External Links for RPS6P15 Gene

GeneLoc Exon Structure for
RPS6P15

Expression for RPS6P15 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS6P15 Gene

genes like me logo Genes that share expression patterns with RPS6P15: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS6P15 Gene

Orthologs for RPS6P15 Gene

Evolution for RPS6P15 Gene

ENSEMBL:
Gene Tree for RPS6P15 (if available)
TreeFam:
Gene Tree for RPS6P15 (if available)

No data available for Orthologs for RPS6P15 Gene

Paralogs for RPS6P15 Gene

No data available for Paralogs for RPS6P15 Gene

Variants for RPS6P15 Gene

Additional Variant Information for RPS6P15 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS6P15

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS6P15 Gene

Disorders for RPS6P15 Gene

Additional Disease Information for RPS6P15

Genetic Association Database
(GAD)

No disorders were found for RPS6P15 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS6P15 Gene

Publications for RPS6P15 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. A genome-wide association study identifies a novel major locus for glycemic control in type 1 diabetes, as measured by both A1C and glucose. (PMID: 19875614) Paterson AD … Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Research Group (Diabetes 2010) 41
  3. Framingham Heart Study 100K Project: genome-wide associations for blood pressure and arterial stiffness. (PMID: 17903302) Levy D … Mitchell GF (BMC medical genetics 2007) 41
  4. Genome-wide association and linkage analyses of hemostatic factors and hematological phenotypes in the Framingham Heart Study. (PMID: 17903294) Yang Q … O'Donnell CJ (BMC medical genetics 2007) 41

Products for RPS6P15 Gene

Sources for RPS6P15 Gene