Aliases for RPS4XP5 Gene

Aliases for RPS4XP5 Gene

  • Ribosomal Protein S4X Pseudogene 5 2 3 5
  • RPS4X_1_232 3
  • RPS4P5 3

External Ids for RPS4XP5 Gene

Previous HGNC Symbols for RPS4XP5 Gene

  • RPS4P5

Previous GeneCards Identifiers for RPS4XP5 Gene

  • GC02M063870

Summaries for RPS4XP5 Gene

GeneCards Summary for RPS4XP5 Gene

RPS4XP5 (Ribosomal Protein S4X Pseudogene 5) is a Pseudogene.

Additional gene information for RPS4XP5 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS4XP5 Gene

Genomics for RPS4XP5 Gene

GeneHancer (GH) Regulatory Elements for RPS4XP5 Gene

Promoters and enhancers for RPS4XP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02J063643 Enhancer 0.2 Ensembl 500.7 +0.4 367 0.6 RPS4XP5 lnc-VPS54-5 MDH1 LOC388955 lnc-VPS54-6 WDPCP lnc-WDPCP-3
GH02J063665 Enhancer 0.8 Ensembl ENCODE 0.4 -23.2 -23233 3.8 ZBTB33 CTCF JUND RAD21 RXRA MAX ATF2 HNF4A REST RNF2 MDH1 WDPCP lnc-VPS54-6 RPS4XP5 lnc-WDPCP-3
GH02J063662 Enhancer 0.6 Ensembl ENCODE 0.4 -18.8 -18840 1.4 RXRA HNF4A HLF GABPA SP1 YY1 MDH1 lnc-VPS54-6 RPS4XP5 WDPCP lnc-WDPCP-3
GH02J063661 Enhancer 0.6 Ensembl ENCODE 0.4 -17.1 -17133 1.6 SPI1 EZH2 HNF4A HNF4G CEBPB MDH1 RPS4XP5 lnc-VPS54-6 WDPCP lnc-WDPCP-3
GH02J063679 Enhancer 0.4 Ensembl 0.3 -35.2 -35233 0.2 EP300 MXI1 POLR2A MDH1 lnc-VPS54-6 RPS4XP5 WDPCP lnc-WDPCP-3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS4XP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS4XP5 Gene

Genomic Locations for RPS4XP5 Gene
chr2:63,642,455-63,644,068
(GRCh38/hg38)
Size:
1,614 bases
Orientation:
Minus strand
chr2:63,869,589-63,871,202
(GRCh37/hg19)
Size:
1,614 bases
Orientation:
Minus strand

Genomic View for RPS4XP5 Gene

Genes around RPS4XP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4XP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4XP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4XP5 Gene

Proteins for RPS4XP5 Gene

Post-translational modifications for RPS4XP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4XP5 Gene

Domains & Families for RPS4XP5 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS4XP5 Gene

Function for RPS4XP5 Gene

Phenotypes From GWAS Catalog for RPS4XP5 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP5 Gene

Localization for RPS4XP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS4XP5 Gene

Pathways & Interactions for RPS4XP5 Gene

PathCards logo

SuperPathways for RPS4XP5 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS4XP5 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS4XP5 Gene

Drugs & Compounds for RPS4XP5 Gene

No Compound Related Data Available

Transcripts for RPS4XP5 Gene

mRNA/cDNA for RPS4XP5 Gene

2 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4XP5 Gene

No ASD Table

Relevant External Links for RPS4XP5 Gene

GeneLoc Exon Structure for
RPS4XP5

Expression for RPS4XP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS4XP5 Gene

mRNA differential expression in normal tissues according to GTEx for RPS4XP5 Gene

This gene is overexpressed in Muscle - Skeletal (x16.9) and Liver (x7.6).
genes like me logo Genes that share expression patterns with RPS4XP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP5 Gene

Orthologs for RPS4XP5 Gene

Evolution for RPS4XP5 Gene

ENSEMBL:
Gene Tree for RPS4XP5 (if available)
TreeFam:
Gene Tree for RPS4XP5 (if available)

No data available for Orthologs for RPS4XP5 Gene

Paralogs for RPS4XP5 Gene

No data available for Paralogs for RPS4XP5 Gene

Variants for RPS4XP5 Gene

Additional Variant Information for RPS4XP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4XP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP5 Gene

Disorders for RPS4XP5 Gene

No disorders were found for RPS4XP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS4XP5 Gene

Publications for RPS4XP5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

Products for RPS4XP5 Gene

Sources for RPS4XP5 Gene