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Aliases for RPS4XP4 Gene

Aliases for RPS4XP4 Gene

  • Ribosomal Protein S4X Pseudogene 4 2 3 5
  • RPS4X_1_17 3
  • RPS4P4 3

External Ids for RPS4XP4 Gene

Previous HGNC Symbols for RPS4XP4 Gene

  • RPS4P4

Previous GeneCards Identifiers for RPS4XP4 Gene

  • GC01P020853

Summaries for RPS4XP4 Gene

GeneCards Summary for RPS4XP4 Gene

RPS4XP4 (Ribosomal Protein S4X Pseudogene 4) is a Pseudogene.

Additional gene information for RPS4XP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS4XP4 Gene

Genomics for RPS4XP4 Gene

GeneHancer (GH) Regulatory Elements for RPS4XP4 Gene

Promoters and enhancers for RPS4XP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J020529 Enhancer 0.8 Ensembl 0.4 +6.9 6949 6.6 CBFA2T2 NCOA3 SMARCA4 CREB1 RFX1 TARDBP POLR2A CTBP1 EP300 SP1 MUL1 FAM43B RPS4XP4 PIR52351 GC01P020552
GH01J020527 Enhancer 0.5 Ensembl 0.7 +2.5 2549 1.8 BCOR HLTF ZMYM3 KDM1A ZNF280D SMARCA5 MUL1 FAM43B RPS4XP4 PIR52351 GC01P020552
GH01J020543 Enhancer 0.4 Ensembl 0.4 +17.4 17449 0.8 ZIC2 GLIS1 MUL1 PINK1 GC01P020552 PIR52351 RPS4XP4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS4XP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS4XP4 Gene

Genomic Locations for RPS4XP4 Gene
chr1:20,525,952-20,526,810
(GRCh38/hg38)
Size:
859 bases
Orientation:
Plus strand
chr1:20,852,445-20,853,303
(GRCh37/hg19)
Size:
859 bases
Orientation:
Plus strand

Genomic View for RPS4XP4 Gene

Genes around RPS4XP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4XP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4XP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4XP4 Gene

Proteins for RPS4XP4 Gene

Post-translational modifications for RPS4XP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4XP4 Gene

Domains & Families for RPS4XP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS4XP4 Gene

Function for RPS4XP4 Gene

Phenotypes From GWAS Catalog for RPS4XP4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP4 Gene

Localization for RPS4XP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS4XP4 Gene

Pathways & Interactions for RPS4XP4 Gene

PathCards logo

SuperPathways for RPS4XP4 Gene

No Data Available

Interacting Proteins for RPS4XP4 Gene

Gene Ontology (GO) - Biological Process for RPS4XP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS4XP4 Gene

Drugs & Compounds for RPS4XP4 Gene

No Compound Related Data Available

Transcripts for RPS4XP4 Gene

mRNA/cDNA for RPS4XP4 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4XP4 Gene

No ASD Table

Relevant External Links for RPS4XP4 Gene

GeneLoc Exon Structure for
RPS4XP4
ECgene alternative splicing isoforms for
RPS4XP4

Expression for RPS4XP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS4XP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS4XP4 Gene:

RPS4XP4
genes like me logo Genes that share expression patterns with RPS4XP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP4 Gene

Orthologs for RPS4XP4 Gene

Evolution for RPS4XP4 Gene

ENSEMBL:
Gene Tree for RPS4XP4 (if available)
TreeFam:
Gene Tree for RPS4XP4 (if available)

No data available for Orthologs for RPS4XP4 Gene

Paralogs for RPS4XP4 Gene

No data available for Paralogs for RPS4XP4 Gene

Variants for RPS4XP4 Gene

Additional Variant Information for RPS4XP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4XP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP4 Gene

Disorders for RPS4XP4 Gene

No disorders were found for RPS4XP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS4XP4 Gene

Publications for RPS4XP4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

No data available for External Links for RPS4XP4 Gene

Products for RPS4XP4 Gene

Sources for RPS4XP4 Gene

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