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Aliases for RPS4XP15 Gene
Aliases for RPS4XP15 Gene
External Ids for RPS4XP15 Gene
- HGNC: 36308
- Entrez Gene: 100131055
- Ensembl: ENSG00000240721
Previous HGNC Symbols for RPS4XP15 Gene
- RPS4P15
Previous GeneCards Identifiers for RPS4XP15 Gene
- GC12P088339
Summaries for RPS4XP15 Gene
GeneCards Summary for RPS4XP15 Gene
RPS4XP15 (Ribosomal Protein S4X Pseudogene 15) is a Pseudogene.
Additional gene information for RPS4XP15 Gene
No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS4XP15 Gene
Genomics for RPS4XP15 Gene
GeneHancer (GH) Regulatory Elements Pubs
Promoters and enhancers for RPS4XP15 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH12J087952 | Enhancer | 0.6 | Ensembl CraniofacialAtlas | 0.4 | +8.2 | 8228 | 0.6 | CTCF FOXA1 RAD21 GATA3 SMC3 ZNF654 | RPS4XP15 lnc-C12orf29-6 piR-47086-099 C12orf29 | |
| GH12J087928 | Enhancer | 0.6 | Ensembl ENCODE | 0.4 | -15.0 | -15003 | 1.8 | SCRT2 JUND CEBPB FOS BHLHE40 | RPS4XP15 lnc-C12orf29-6 piR-30444-086 C12orf29 | |
| GH12J087931 | Enhancer | 0.4 | ENCODE | 0.4 | -12.9 | -12946 | 0.7 | CEBPB FOS MAFK NFE2L2 | RPS4XP15 lnc-C12orf29-6 piR-30444-086 C12orf29 | |
| GH12J087939 | Enhancer | 0.3 | Ensembl | 0.4 | -5.5 | -5484 | 0.4 | NANOG | RPS4XP15 lnc-C12orf29-6 piR-30444-086 C12orf29 | |
| GH12J087927 | Enhancer | 0.2 | ENCODE | 0.4 | -16.7 | -16658 | 1 | ENSG00000258179 RPS4XP15 lnc-C12orf29-6 piR-30444-086 C12orf29 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data from 2017 publication |
Request up-to-date GeneHancer data (full dataset)
GeneHancers around RPS4XP15 on the GeneHancer Hub at the UCSC Golden Path
Genomic Locations for RPS4XP15 Gene
Genomic Locations for RPS4XP15 Gene
- chr12:87,944,885-87,950,819
- (GRCh38/hg38)
- Size:
- 5,935 bases
- Orientation:
- Plus strand
- chr12:88,338,662-88,344,596
- (GRCh37/hg19)
- Size:
- 5,935 bases
- Orientation:
- Plus strand
Genomic View for RPS4XP15 Gene
Genes around RPS4XP15 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 12q21.32 by HGNC
- 12q21.32 by Entrez Gene
- 12q21.32 by Ensembl
RPS4XP15 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for RPS4XP15 Gene
Proteins for RPS4XP15 Gene
Post-translational modifications for RPS4XP15 Gene
No Post-translational modifications
Antibody Products
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS4XP15
- Origene Custom Protein Services for RPS4XP15
No data available for DME Specific Peptides for RPS4XP15 Gene
Domains & Families for RPS4XP15 Gene
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS4XP15 Gene
Function for RPS4XP15 Gene
Phenotypes From GWAS Catalog for RPS4XP15 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPS4XP15 - Select products 50% OFF >
- * RPS4XP15 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPS4XP15
miRNA Products
Inhibitory RNA Products
Clone Products
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP15 Gene
Localization for RPS4XP15 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS4XP15 Gene
Transcripts for RPS4XP15 Gene
mRNA/cDNA for RPS4XP15 Gene
- 1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :
-
- ENST00000489210 795 nts (view in UCSC)
CRISPR Products
- Applied Biological Materials (abm): CRISPR Clones for RPS4XP15 - Select products 50% OFF >
- * RPS4XP15 CRISPR as ready-to-use vector or virus: ORF | Lenti- | Adeno- | AAV- | Protein Vector - Browse All
- * Gene synthesis, site-directed mutagenesis, subcloning, and more services - Browse All
- Browse CRISPR knockouts for RPS4XP15
miRNA Products
Inhibitory RNA Products
Clone Products
Relevant External Links for RPS4XP15 Gene
- GeneLoc Exon Structure for
- RPS4XP15
Expression for RPS4XP15 Gene
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP15 Gene
Orthologs for RPS4XP15 Gene
No data available for Orthologs for RPS4XP15 Gene
Paralogs for RPS4XP15 Gene
No data available for Paralogs for RPS4XP15 Gene
Variants for RPS4XP15 Gene
Additional Variant Information for RPS4XP15 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- RPS4XP15
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP15 Gene
Disorders for RPS4XP15 Gene
No disorders were found for RPS4XP15 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS4XP15 Gene
Publications for RPS4XP15 Gene
- Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
No data available for Mastermind for RPS4XP15 Gene
Products for RPS4XP15 Gene
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for RPS4XP15
- Origene Custom Protein Services for RPS4XP15
- Browse OriGene Inhibitory RNA Products For RPS4XP15
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for RPS4XP15
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For RPS4XP15
- Browse Sino Biological cDNA Clones
- Browse Sino Biological Recombinant Proteins
- Browse Sino Biological Cell Lysates
- Browse Sino Biological Antibodies
- Browse Sino Biological Assays
- Browse ELISA Kits
- Browse CRO Services
- High-throughput Antibody Production Service
- Protein Production Service
- Epitope Tag Antibodies & Reporter Protein Antibodies
- Lentiviral ORF Clones
- Browse GeneCopoeia Cell Lines
- Search GeneCopoeia for knockout CRISPR/Cas9 clones, lentivirus, and/or AAV products for RPS4XP15
- Search GeneCopoeia for ORF cDNA, lentivirus, AAV viral particles, and/or promoter clone products for RPS4XP15
- Search GeneCopoeia for miRNA 3'UTR Target clone products for RPS4XP15
- Search GeneCopoeia for shRNA, lentivirus, and/or AAV clone products for RPS4XP15
Sources for RPS4XP15 Gene
- (1) GeneCards
- (2) HGNC
- (3) NCBI Entrez Gene
- (4) UniProtKB/Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) Cell Signaling Technology
- (12) GO
- (13) UniProtKB/TrEMBL
- (14) InterPro
- (15) ProtoNet
- (16) Blocks
- (17) MGI
- (18) IUBMB
- (19) KEGG
- (20) MINT
- (21) STRING
- (22) IntAct
- (23) Novoseek
- (24) PharmGKB
- (25) DrugBank
- (26) HMDB
- (27) ASD
- (28) SAGE
- (29) SOURCE
- (30) HomoloGene
- (31) PanEnsembl
- (32) euGenes
- (33) SGD
- (34) FlyBase
- (35) WormBase
- (36) Pseudogene
- (37) DGV
- (38) dbSNP
- (39) GenAtlas
- (40) HGMD
- (41) GAD
- (42) BGMUT
- (43) HuGE
- (44) Atlas
- (45) GenBank
- (46) HORDE
- (47) HUGE
- (48) IMGT
- (49) Leiden
- (50) miRBase
- (51) DME
- (52) OriGene
- (53) PubMed
- (54) R&D Systems
- (55) TGDB
- (56) Tocris
- (57) Abcam
- (58) Novus Biologicals
- (59) ProSpec
- (60) Sino Biological
- (61) GenScript
- (62) Qiagen
- (63) OCA
- (64) Proteopedia
- (65) MOPED
- (66) neXtProt
- (67) Reactome
- (68) GeneGo (Thomson Reuters)
- (69) DISEASES
- (70) SIMAP
- (71) GenomeRNAi
- (72) LifeMap
- (73) miRTarBase
- (74) MalaCards
- (75) Invitrogen
- (76) BitterDB
- (77) ESI-BIO
- (78) RefSeq
- (79) BioSystems
- (80) MaxQB
- (81) IUPHAR
- (82) BioGPS
- (83) Illumina
- (84) COMPARTMENTS
- (85) HOMER
- (86) PaxDb
- (87) ApexBio
- (88) Addgene
- (89) antibodies-online
- (90) CYP
- (91) NONCODE
- (92) TreeFam
- (93) PathCards
- (94) GeneReviews
- (95) GeneTex
- (96) Taconic Biosciences
- (97) GTEx
- (98) ProteomicsDB
- (99) SCBT
- (100) DGIdb
- (101) ClinicalTrials
- (102) RVIS
- (103) SIGNOR
- (104) diseasecard
- (105) NIH Rare Diseases
- (106) Orphanet
- (107) UMLS
- (108) GTR
- (109) Disease Ontology
- (110) Genetics Home Reference
- (111) MeSH
- (112) MedlinePlus
- (113) CDC
- (114) NINDS
- (115) NCBI Bookshelf
- (116) ClinVar
- (117) Gene Damage Index
- (118) HPO
- (119) UDN
- (120) VISTA
- (121) FANTOM5
- (122) ENCODE
- (123) ProSci
- (124) Horizon
- (125) The Signaling Pathways Project (SPP)
- (126) IID
- (127) VectorBuilder
- (128) SNPedia
- (129) BRCA Exchange
- (130) CIViC
- (131) ProteoGenix
- (132) dbSUPER
- (133) TISSUES
- (134) Gene ORGANizer
- (135) abm
- (136) Human Protein Atlas
- (137) GWAS Catalog
- (138) Monarch Initiative
- (139) DataMed
- (140) HumanCyc
- (141) UCNEbase
- (142) EPDnew
- (143) Applied Biosystems
- (144) GlyConnect
- (145) Aminode
- (146) GeneCopoeia
- (147) GPS-Prot
- (148) RNACentral
- (149) LncRNADisease
- (150) LOVD
- (151) miR2Disease
- (152) DiseaseEnhancer
- (153) Boster Bio
- (154) Biorbyt
- (155) Biocompare
- (156) Mastermind
- (157) CTD^2 Dashboard
- (158) CraniofacialAtlas
- (159) GeneImprint
- (160) Synthego
- (161) ENA
- (162) GtRNAdb
- (163) LncBase
- (164) LncBook
- (165) LNCipedia
- (166) Modomics
- (167) PDBe
- (168) Rfam
- (169) SILVA
- (170) snOPY
- (171) SRPDB
- (172) GENCODE
- (173) TarBase
- (174) Signalway Antibody
- (175) Open Targets Platform
- (176) 5SRRNADB
- (177) snoDB
- (178) MirGeneDB