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Aliases for RPS4XP11 Gene

Aliases for RPS4XP11 Gene

  • Ribosomal Protein S4X Pseudogene 11 2 3 5
  • Ribosomal Protein S4, X-Linked Pseudogene 3
  • RPS4X_2_1029 3
  • RPS4P11 3

External Ids for RPS4XP11 Gene

Previous HGNC Symbols for RPS4XP11 Gene

  • RPS4P11

Previous GeneCards Identifiers for RPS4XP11 Gene

  • GC10M032392

Summaries for RPS4XP11 Gene

GeneCards Summary for RPS4XP11 Gene

RPS4XP11 (Ribosomal Protein S4X Pseudogene 11) is a Pseudogene.

Additional gene information for RPS4XP11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS4XP11 Gene

Genomics for RPS4XP11 Gene

GeneHancer (GH) Regulatory Elements for RPS4XP11 Gene

Promoters and enhancers for RPS4XP11 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I032104 Enhancer 0.7 ENCODE 550.8 -1.3 -1283 0.9 ELF3 SOX13 FOXA2 ZNF792 SAP130 ZNF48 RARA LCORL GLIS2 ZSCAN5C RPS4XP11 KIF5B ENSG00000235113
GH10I032970 Enhancer 1.3 Ensembl ENCODE dbSUPER 5.3 -868.7 -868664 2.6 ATF1 PKNOX1 ARNT TCF12 FOS RXRA NCOA1 REST ZNF592 MBD2 LOC105376486 CCDC7 RPS4XP11 ITGB1-DT ITGB1
GH10I031934 Enhancer 1 ENCODE dbSUPER 4.6 +166.9 166920 3 CLOCK FOXA2 THRB RARA ZNF335 ZNF121 ZNF766 FOS SMARCA5 ZNF362 KIF5B ARHGAP12 RPS4XP11 GC10P031934 GC10P031969
GH10I032084 Enhancer 0.3 ENCODE 4.7 +18.7 18653 0.2 SPI1 RPS4XP11 ENSG00000206660
GH10I032105 Enhancer 0.9 ENCODE 0.8 -2.8 -2771 1.3 CLOCK FOXA2 MLX ARID4B DMAP1 ZNF48 SP5 NFYC MIER2 PPARG CCDC7 ENSG00000235113 RPS4XP11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS4XP11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS4XP11 Gene

Genomic Locations for RPS4XP11 Gene
chr10:32,102,453-32,103,341
(GRCh38/hg38)
Size:
889 bases
Orientation:
Minus strand
chr10:32,391,381-32,392,269
(GRCh37/hg19)

Genomic View for RPS4XP11 Gene

Genes around RPS4XP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS4XP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS4XP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS4XP11 Gene

Proteins for RPS4XP11 Gene

Post-translational modifications for RPS4XP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS4XP11 Gene

Domains & Families for RPS4XP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS4XP11 Gene

Function for RPS4XP11 Gene

Phenotypes From GWAS Catalog for RPS4XP11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS4XP11 Gene

Localization for RPS4XP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS4XP11 Gene

Pathways & Interactions for RPS4XP11 Gene

SuperPathways for RPS4XP11 Gene

No Data Available

Interacting Proteins for RPS4XP11 Gene

Gene Ontology (GO) - Biological Process for RPS4XP11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS4XP11 Gene

Drugs & Compounds for RPS4XP11 Gene

No Compound Related Data Available

Transcripts for RPS4XP11 Gene

mRNA/cDNA for RPS4XP11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS4XP11 Gene

No ASD Table

Relevant External Links for RPS4XP11 Gene

GeneLoc Exon Structure for
RPS4XP11
ECgene alternative splicing isoforms for
RPS4XP11

Expression for RPS4XP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS4XP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS4XP11 Gene:

RPS4XP11
genes like me logo Genes that share expression patterns with RPS4XP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS4XP11 Gene

Orthologs for RPS4XP11 Gene

Evolution for RPS4XP11 Gene

ENSEMBL:
Gene Tree for RPS4XP11 (if available)
TreeFam:
Gene Tree for RPS4XP11 (if available)

No data available for Orthologs for RPS4XP11 Gene

Paralogs for RPS4XP11 Gene

No data available for Paralogs for RPS4XP11 Gene

Variants for RPS4XP11 Gene

Additional Variant Information for RPS4XP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS4XP11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS4XP11 Gene

Disorders for RPS4XP11 Gene

Additional Disease Information for RPS4XP11

Genetic Association Database
(GAD)

No disorders were found for RPS4XP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS4XP11 Gene

Publications for RPS4XP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS4XP11 Gene

Sources for RPS4XP11 Gene

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