Aliases for RPS3P7 Gene

Aliases for RPS3P7 Gene

  • Ribosomal Protein S3 Pseudogene 7 2 3 5
  • RPS3_3_1501 3

External Ids for RPS3P7 Gene

Previous GeneCards Identifiers for RPS3P7 Gene

  • GC16U900953
  • GC16P078860

Summaries for RPS3P7 Gene

GeneCards Summary for RPS3P7 Gene

RPS3P7 (Ribosomal Protein S3 Pseudogene 7) is a Pseudogene.

Additional gene information for RPS3P7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS3P7 Gene

Genomics for RPS3P7 Gene

GeneHancer (GH) Regulatory Elements for RPS3P7 Gene

Promoters and enhancers for RPS3P7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH16J078817 Enhancer 0.7 Ensembl ENCODE 0.4 -7.7 -7651 1.6 FOXA2 NR2F2 JUND RXRA HNF4A FOXA1 CEBPB HNF4G ATF3 SP1 RPS3P7 ENSG00000286894 WWOX
GH16J078798 Enhancer 0.8 VISTA UCNEbase Ensembl 0.3 -26.2 -26209 1.5 USF1 HNF4G ENSG00000286894 RPS3P7 WWOX
GH16J078822 Enhancer 0.4 Ensembl 0.7 -2.2 -2151 1 ZNF316 MAFF MAFK RPS3P7 ENSG00000286894 WWOX
GH16J078815 Enhancer 0.6 Ensembl ENCODE 0.4 -9.4 -9363 1 CEBPG NR2F2 CEBPB RPS3P7 ENSG00000286894 WWOX
GH16J078800 Enhancer 0.4 Ensembl 0.4 -24.7 -24651 0.4 GATA3 CTCF RAD21 HLF ENSG00000286894 RPS3P7 WWOX
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS3P7 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS3P7 Gene

Genomic Locations for RPS3P7 Gene
chr16:78,825,252-78,826,085
(GRCh38/hg38)
Size:
834 bases
Orientation:
Plus strand
chr16:78,859,149-78,859,982
(GRCh37/hg19)
Size:
834 bases
Orientation:
Plus strand

Genomic View for RPS3P7 Gene

Genes around RPS3P7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3P7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3P7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3P7 Gene

Proteins for RPS3P7 Gene

Post-translational modifications for RPS3P7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3P7 Gene

Domains & Families for RPS3P7 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS3P7 Gene

Function for RPS3P7 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3P7 Gene

Localization for RPS3P7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3P7 Gene

Pathways & Interactions for RPS3P7 Gene

PathCards logo

SuperPathways for RPS3P7 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS3P7 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS3P7 Gene

Drugs & Compounds for RPS3P7 Gene

No Compound Related Data Available

Transcripts for RPS3P7 Gene

mRNA/cDNA for RPS3P7 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3P7 Gene

No ASD Table

Relevant External Links for RPS3P7 Gene

GeneLoc Exon Structure for
RPS3P7

Expression for RPS3P7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3P7 Gene

mRNA differential expression in normal tissues according to GTEx for RPS3P7 Gene

This gene is overexpressed in Minor Salivary Gland (x14.6), Cervix - Endocervix (x4.2), and Brain - Cerebellum (x4.2).
genes like me logo Genes that share expression patterns with RPS3P7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3P7 Gene

Orthologs for RPS3P7 Gene

Evolution for RPS3P7 Gene

ENSEMBL:
Gene Tree for RPS3P7 (if available)
TreeFam:
Gene Tree for RPS3P7 (if available)

No data available for Orthologs for RPS3P7 Gene

Paralogs for RPS3P7 Gene

No data available for Paralogs for RPS3P7 Gene

Variants for RPS3P7 Gene

Additional Variant Information for RPS3P7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3P7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3P7 Gene

Disorders for RPS3P7 Gene

Additional Disease Information for RPS3P7

Genetic Association Database
(GAD)

No disorders were found for RPS3P7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS3P7 Gene

Publications for RPS3P7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3 54
  3. Meta-analysis of genome-wide association studies identifies eight new loci for type 2 diabetes in east Asians. (PMID: 22158537) Cho YS … Seielstad M (Nature genetics 2011) 41 54
  4. Genetic variants that affect length/height in infancy/early childhood in Vietnamese-Korean families. (PMID: 20668459) Kim HN … Kim HL (Journal of human genetics 2010) 41 54
  5. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41 54

Products for RPS3P7 Gene

Sources for RPS3P7 Gene