Aliases for RPS3P2 Gene

Aliases for RPS3P2 Gene

  • Ribosomal Protein S3 Pseudogene 2 2 3 5
  • DJ927M24.3 2 3
  • RPS3_4_1701 3
  • RPS3P2 5

External Ids for RPS3P2 Gene

Previous GeneCards Identifiers for RPS3P2 Gene

  • GC20U990146
  • GC20M036805
  • GC20P037755
  • GC20P037787
  • GC20P037788
  • GC20P036599
  • GC20P037167
  • GC20P033903

Summaries for RPS3P2 Gene

GeneCards Summary for RPS3P2 Gene

RPS3P2 (Ribosomal Protein S3 Pseudogene 2) is a Pseudogene.

Additional gene information for RPS3P2 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS3P2 Gene

Genomics for RPS3P2 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS3P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH20J038536 Enhancer 0.3 ENCODE 600.7 -1.1 -1140 1.2 CTCF RPS3P2 ADIG ARHGAP40 ENSG00000224635 MIR548O2 RALGAPB
GH20J038433 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas 19 -103.3 -103250 3.8 ARHGAP35 SP1 HNRNPL CREB1 GATAD2A CTCF TEAD4 PRDM10 REST ZNF629 SNHG17 HSALNG0129984 SNORA71D RALGAPB ACTR5 ENSG00000224635 TTI1 SNORA71C RN7SKP173 SNORA71A
GH20J038139 Promoter/Enhancer 2.5 EPDnew FANTOM5 Ensembl ENCODE CraniofacialAtlas dbSUPER 10.6 -381.8 -381760 33.6 ARHGAP35 CEBPG HNRNPL CREB1 GATAD2A CTCF ATF7 TEAD4 YBX1 PRDM10 TGM2 RALGAPB ACTR5 RN7SKP173 SNHG17 TTI1 SNORA71A SNORA71C DHX35 RPN2
GH20J038031 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 10.6 -504.0 -503990 3.7 RNF2 SP1 HNRNPL CREB1 GATAD2A PRDM10 REST ZNF629 TFE3 RFX1 TTI1 RPRD1B SNHG17 ACTR5 RALGAPB VSTM2L SNORA71C SNORA71A RN7SKP173 RBL1
GH20J038446 Promoter/Enhancer 1.8 Ensembl ENCODE CraniofacialAtlas 10.2 -90.3 -90310 2.9 SP1 HNRNPL CREB1 GATAD2A CTCF PRDM10 ZNF629 TFE3 LEF1 IKZF1 SNHG11 SNORA60 SNORA71E SNHG17 ACTR5 ENSG00000224635 RALGAPB RN7SKP173 TTI1 CTNNBL1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS3P2 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS3P2 Gene

Genomic Locations for RPS3P2 Gene
chr20:38,537,750-38,538,459
(GRCh38/hg38)
Size:
710 bases
Orientation:
Plus strand
chr20:37,166,393-37,167,102
(GRCh37/hg19)
Size:
710 bases
Orientation:
Plus strand

Genomic View for RPS3P2 Gene

Genes around RPS3P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3P2 Gene

Proteins for RPS3P2 Gene

Post-translational modifications for RPS3P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3P2 Gene

Domains & Families for RPS3P2 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS3P2 Gene

Function for RPS3P2 Gene

Phenotypes From GWAS Catalog for RPS3P2 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3P2 Gene

Localization for RPS3P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3P2 Gene

Pathways & Interactions for RPS3P2 Gene

PathCards logo

SuperPathways for RPS3P2 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS3P2 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS3P2 Gene

Drugs & Compounds for RPS3P2 Gene

No Compound Related Data Available

Transcripts for RPS3P2 Gene

mRNA/cDNA for RPS3P2 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3P2 Gene

No ASD Table

Relevant External Links for RPS3P2 Gene

GeneLoc Exon Structure for
RPS3P2

Expression for RPS3P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3P2 Gene

genes like me logo Genes that share expression patterns with RPS3P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3P2 Gene

Orthologs for RPS3P2 Gene

Evolution for RPS3P2 Gene

ENSEMBL:
Gene Tree for RPS3P2 (if available)
TreeFam:
Gene Tree for RPS3P2 (if available)

No data available for Orthologs for RPS3P2 Gene

Paralogs for RPS3P2 Gene

No data available for Paralogs for RPS3P2 Gene

Variants for RPS3P2 Gene

Additional Variant Information for RPS3P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3P2 Gene

Disorders for RPS3P2 Gene

No disorders were found for RPS3P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3P2 Gene

Publications for RPS3P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS3P2 Gene

Products for RPS3P2 Gene

Sources for RPS3P2 Gene