Aliases for RPS3AP8 Gene

Aliases for RPS3AP8 Gene

  • RPS3A Pseudogene 8 2 3
  • Ribosomal Protein S3a Pseudogene 8 2 3
  • RPS3A_3_138 3

External Ids for RPS3AP8 Gene

Previous GeneCards Identifiers for RPS3AP8 Gene

  • GC01U902366
  • GC01P183236
  • GC01P183268

Summaries for RPS3AP8 Gene

GeneCards Summary for RPS3AP8 Gene

RPS3AP8 (RPS3A Pseudogene 8) is a Pseudogene.

Additional gene information for RPS3AP8 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS3AP8 Gene

Genomics for RPS3AP8 Gene

GeneHancer (GH) Regulatory Elements for RPS3AP8 Gene

Promoters and enhancers for RPS3AP8 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J183267 Enhancer 0.9 Ensembl ENCODE dbSUPER 500.7 +1.7 1701 2.4 FOS CEBPB ZFHX2 MAFK STAT3 ZNF664 GATA2 RAD21 BHLHE40 POLR2A ENSG00000233562 RPS3AP8 lnc-LAMC2-3 LAMC2 piR-42694-014 NMNAT2
GH01J183263 Enhancer 0.3 Ensembl dbSUPER 500.7 -1.3 -1299 0.8 ENSG00000233562 RPS3AP8 lnc-LAMC2-3 LAMC2 ENSG00000287929 NMNAT2
GH01J183262 Enhancer 0.4 ENCODE 0.7 -3.3 -3254 0.6 ZNF217 CTBP1 ESR1 RPS3AP8 ENSG00000287929 NMNAT2
GH01J183259 Enhancer 0.5 Ensembl 0.4 -6.3 -6300 1.2 SPI1 IKZF1 NR2F1 TBX21 POU5F1 MTA2 IKZF2 DPF2 GATAD2B LAMC2 ENSG00000287929 RPS3AP8 NMNAT2
GH01J183257 Enhancer 0.3 Ensembl 0.4 -8.4 -8399 0.2 TBX21 ENSG00000287929 RPS3AP8 NMNAT2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS3AP8 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS3AP8 Gene

Genomic Locations for RPS3AP8 Gene
chr1:183,266,500-183,267,271
(GRCh38/hg38)
Size:
772 bases
Orientation:
Plus strand
chr1:183,235,635-183,236,420
(GRCh37/hg19)
Size:
786 bases
Orientation:
Plus strand

Genomic View for RPS3AP8 Gene

Genes around RPS3AP8 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP8 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP8 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP8 Gene

Proteins for RPS3AP8 Gene

Post-translational modifications for RPS3AP8 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP8 Gene

Domains & Families for RPS3AP8 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS3AP8 Gene

Function for RPS3AP8 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP8 Gene

Localization for RPS3AP8 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP8 Gene

Pathways & Interactions for RPS3AP8 Gene

PathCards logo

SuperPathways for RPS3AP8 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS3AP8 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS3AP8 Gene

Drugs & Compounds for RPS3AP8 Gene

No Compound Related Data Available

Transcripts for RPS3AP8 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP8 Gene

No ASD Table

Relevant External Links for RPS3AP8 Gene

GeneLoc Exon Structure for
RPS3AP8

No data available for mRNA/cDNA for RPS3AP8 Gene

Expression for RPS3AP8 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3AP8 Gene

mRNA differential expression in normal tissues according to GTEx for RPS3AP8 Gene

This gene is overexpressed in Brain - Cerebellum (x17.7), Brain - Cerebellar Hemisphere (x10.3), and Pituitary (x6.0).
genes like me logo Genes that share expression patterns with RPS3AP8: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP8 Gene

Orthologs for RPS3AP8 Gene

No data available for Orthologs and Evolution for RPS3AP8 Gene

Paralogs for RPS3AP8 Gene

No data available for Paralogs for RPS3AP8 Gene

Variants for RPS3AP8 Gene

Additional Variant Information for RPS3AP8 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP8

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP8 Gene

Disorders for RPS3AP8 Gene

No disorders were found for RPS3AP8 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP8 Gene

Publications for RPS3AP8 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPS3AP8 Gene

Products for RPS3AP8 Gene

Sources for RPS3AP8 Gene