Aliases for RPS3AP7 Gene

Aliases for RPS3AP7 Gene

  • RPS3A Pseudogene 7 2 3 5
  • Ribosomal Protein S3a Pseudogene 7 2 3
  • RPS3A_5_169 3
  • RPS3AP7 5

External Ids for RPS3AP7 Gene

Previous GeneCards Identifiers for RPS3AP7 Gene

  • GC01P224693
  • GC01P226627

Summaries for RPS3AP7 Gene

GeneCards Summary for RPS3AP7 Gene

RPS3AP7 (RPS3A Pseudogene 7) is a Pseudogene.

Additional gene information for RPS3AP7 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS3AP7 Gene

Genomics for RPS3AP7 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS3AP7 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J226436 Enhancer 0.8 Ensembl ENCODE 250.7 -1.2 -1237 1.4 ZNF223 ZNF362 NFIB GLIS1 ZNF398 CTCF ZNF366 OSR2 ZBTB17 ZBTB20 HSALNG0011079 RPS3AP7 STUM PARP1 CDC42BPA lnc-PARP1-2 ENSG00000270287
GH01J226424 Enhancer 0.7 ENCODE 0.4 -13.8 -13843 0.2 ZNF654 ZNF600 ZNF10 REST TRIM22 CTCF RAD21 SMC3 ZNF2 ZNF24 STUM LIN9 PYCR2 lnc-PARP1-2 ENSG00000270287 RPS3AP7 PARP1
GH01J226425 Enhancer 0.6 ENCODE 0.4 -13.0 -12958 0.9 SUPT5H BATF ZBTB33 ZNF362 HDGF POLR2A ATF2 JUNB NFATC3 IKZF1 STUM LIN9 PARP1 PSEN2 lnc-PARP1-2 ENSG00000270287 RPS3AP7
GH01J226418 Enhancer 0.4 Ensembl 0.4 -20.6 -20637 1.8 ATF2 ZIC2 FOXA2 PARP1 STUM ENSG00000270287 lnc-PARP1-2 RPS3AP7
GH01J226421 Enhancer 0.3 Ensembl 0.4 -17.9 -17937 0.4 ZFX PARP1 STUM ENSG00000270287 lnc-PARP1-2 RPS3AP7
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS3AP7 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS3AP7 Gene

Latest Assembly
chr1:226,438,538-226,439,394
(GRCh38/hg38)
Size:
857 bases
Orientation:
Plus strand

Previous Assembly
chr1:226,626,239-226,627,095
(GRCh37/hg19 by Entrez Gene)
Size:
857 bases
Orientation:
Plus strand

chr1:226,626,265-226,627,045
(GRCh37/hg19 by Ensembl)
Size:
781 bases
Orientation:
Plus strand

Genomic View for RPS3AP7 Gene

Genes around RPS3AP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP7 Gene

Proteins for RPS3AP7 Gene

Post-translational modifications for RPS3AP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP7 Gene

Domains & Families for RPS3AP7 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS3AP7 Gene

Function for RPS3AP7 Gene

Phenotypes From GWAS Catalog for RPS3AP7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP7 Gene

Localization for RPS3AP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP7 Gene

Pathways & Interactions for RPS3AP7 Gene

PathCards logo

SuperPathways for RPS3AP7 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS3AP7 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS3AP7 Gene

Drugs & Compounds for RPS3AP7 Gene

No Compound Related Data Available

Transcripts for RPS3AP7 Gene

mRNA/cDNA for RPS3AP7 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP7 Gene

No ASD Table

Relevant External Links for RPS3AP7 Gene

GeneLoc Exon Structure for
RPS3AP7

Expression for RPS3AP7 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3AP7 Gene

genes like me logo Genes that share expression patterns with RPS3AP7: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP7 Gene

Orthologs for RPS3AP7 Gene

Evolution for RPS3AP7 Gene

ENSEMBL:
Gene Tree for RPS3AP7 (if available)
TreeFam:
Gene Tree for RPS3AP7 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPS3AP7

No data available for Orthologs for RPS3AP7 Gene

Paralogs for RPS3AP7 Gene

No data available for Paralogs for RPS3AP7 Gene

Variants for RPS3AP7 Gene

Additional Variant Information for RPS3AP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP7
Leiden Open Variation Database (LOVD)
RPS3AP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP7 Gene

Disorders for RPS3AP7 Gene

No disorders were found for RPS3AP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP7 Gene

Publications for RPS3AP7 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS3AP7 Gene

Products for RPS3AP7 Gene

Sources for RPS3AP7 Gene