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Aliases for RPS3AP53 Gene

Aliases for RPS3AP53 Gene

  • Ribosomal Protein S3a Pseudogene 53 2 3 5

External Ids for RPS3AP53 Gene

Previous GeneCards Identifiers for RPS3AP53 Gene

  • GC03P015184
  • GC03P015186
  • GC03P015187
  • GC03P015196
  • GC03P015212
  • GC03P015232
  • GC03P015250

Summaries for RPS3AP53 Gene

GeneCards Summary for RPS3AP53 Gene

RPS3AP53 (Ribosomal Protein S3a Pseudogene 53) is a Pseudogene.

Additional gene information for RPS3AP53 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP53 Gene

Genomics for RPS3AP53 Gene

GeneHancer (GH) Regulatory Elements for RPS3AP53 Gene

Promoters and enhancers for RPS3AP53 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I015323 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 5.2 +187.4 187400 11.1 HDGF PKNOX1 CLOCK FOXA2 SIN3A FEZF1 ZBTB7B IRF4 YY1 ZNF143 SH3BP5 RBSN SH3BP5-AS1 CCDC174 METTL6 NR2C2 ENSG00000270409 CAPN7 HACL1 RPS3AP53
GH03I015287 Enhancer 1.7 FANTOM5 Ensembl ENCODE dbSUPER 7.5 +151.1 151096 10.9 HNRNPUL1 PKNOX1 CLOCK ATF1 NEUROD1 SIN3A BRCA1 YY1 TCF12 GATA2 SH3BP5 CAPN7 CCDC174 EAF1 NR2C2 RPS24P10 SH3BP5-AS1 RNU6-454P COL6A4P1 RNU6-1024P
GH03I014946 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE 4.7 -192.8 -192779 4.7 PKNOX1 CLOCK SMAD1 ARID4B NEUROD1 SIN3A DMAP1 ZBTB7B YY1 SLC30A9 NR2C2 FGD5-AS1 CCDC174 SH3BP5-AS1 ENSG00000228242 CAPN7 EAF1-AS1 HACL1 XPC METTL6
GH03I015318 Enhancer 1.3 Ensembl ENCODE dbSUPER 5.2 +179.1 179057 3.6 ZNF133 FEZF1 ZNF2 YY1 ZNF121 KLF7 KLF13 RXRA REST TSHZ1 ENSG00000270409 SH3BP5 RPS3AP53 GC03P015339 PIR49400
GH03I014396 Enhancer 0.6 dbSUPER 5 -744.7 -744654 1 SMARCA5 NCOA3 KLF1 ZNF398 ZNF623 ZNF316 POLR2A ZNF341 GLIS1 KLF8 RPS3AP53 RPS24P10 LOC105376959 RNA5SP124
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS3AP53 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS3AP53 Gene

Genomic Locations for RPS3AP53 Gene
chr3:15,141,356-15,142,204
(GRCh38/hg38)
Size:
849 bases
Orientation:
Plus strand
chr3:15,182,863-15,183,711
(GRCh37/hg19)

Genomic View for RPS3AP53 Gene

Genes around RPS3AP53 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP53 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP53 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP53 Gene

Proteins for RPS3AP53 Gene

Post-translational modifications for RPS3AP53 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP53 Gene

Domains & Families for RPS3AP53 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP53 Gene

Function for RPS3AP53 Gene

Phenotypes From GWAS Catalog for RPS3AP53 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP53 Gene

Localization for RPS3AP53 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP53 Gene

Pathways & Interactions for RPS3AP53 Gene

SuperPathways for RPS3AP53 Gene

No Data Available

Interacting Proteins for RPS3AP53 Gene

Gene Ontology (GO) - Biological Process for RPS3AP53 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP53 Gene

Drugs & Compounds for RPS3AP53 Gene

No Compound Related Data Available

Transcripts for RPS3AP53 Gene

mRNA/cDNA for RPS3AP53 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP53 Gene

No ASD Table

Relevant External Links for RPS3AP53 Gene

GeneLoc Exon Structure for
RPS3AP53
ECgene alternative splicing isoforms for
RPS3AP53

Expression for RPS3AP53 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP53 Gene

mRNA differential expression in normal tissues according to GTEx for RPS3AP53 Gene

This gene is overexpressed in Nerve - Tibial (x11.4), Vagina (x10.1), Cervix - Ectocervix (x8.8), and Cervix - Endocervix (x5.4).

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP53 Gene:

RPS3AP53
genes like me logo Genes that share expression patterns with RPS3AP53: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP53 Gene

Orthologs for RPS3AP53 Gene

Evolution for RPS3AP53 Gene

ENSEMBL:
Gene Tree for RPS3AP53 (if available)
TreeFam:
Gene Tree for RPS3AP53 (if available)

No data available for Orthologs for RPS3AP53 Gene

Paralogs for RPS3AP53 Gene

No data available for Paralogs for RPS3AP53 Gene

Variants for RPS3AP53 Gene

Additional Variant Information for RPS3AP53 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP53

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP53 Gene

Disorders for RPS3AP53 Gene

No disorders were found for RPS3AP53 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP53 Gene

Publications for RPS3AP53 Gene

No publications were found for RPS3AP53 Gene.

Products for RPS3AP53 Gene

Sources for RPS3AP53 Gene

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