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Aliases for RPS3AP5 Gene

Aliases for RPS3AP5 Gene

  • Ribosomal Protein S3A Pseudogene 5 2 3 5
  • RPS3A_15_1074 3
  • BA486O22.3 3

External Ids for RPS3AP5 Gene

Previous GeneCards Identifiers for RPS3AP5 Gene

  • GC10U900524
  • GC10P086312
  • GC10P080165

Summaries for RPS3AP5 Gene

GeneCards Summary for RPS3AP5 Gene

RPS3AP5 (Ribosomal Protein S3A Pseudogene 5) is a Pseudogene.

Additional gene information for RPS3AP5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS3AP5 Gene

Genomics for RPS3AP5 Gene

GeneHancer (GH) Regulatory Elements for RPS3AP5 Gene

Promoters and enhancers for RPS3AP5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I084137 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 12 -421.0 -421018 4.2 FEZF1 DMAP1 YY1 E2F8 ZNF143 SP3 NFYC SSRP1 ZNF610 NBN GHITM ENSG00000271933 RPS3AP5 CDHR1 C10orf99 GC10M084047
GH10I083983 Enhancer 0.9 ENCODE 17.8 -576.6 -576624 1 PKNOX1 FEZF1 GLIS2 RUNX3 REST TSHZ1 ZNF518A ZNF184 GLIS1 NR2C1 RPS3AP5 ENSG00000271933 LOC105378398 RNU1-65P LOC105378399
GH10I084186 Enhancer 0.7 dbSUPER 21.8 -373.0 -372964 2 HDGF HDAC1 ZSCAN4 ZNF266 ZNF175 GLI4 CDC5L ZNF239 SRF SOX6 ENSG00000271933 RPS3AP5 CDHR1 LRIT2 GHITM GC10P084182
GH10I084348 Enhancer 0.7 Ensembl ENCODE 10.5 -211.3 -211342 1.5 ZNF202 JUND ZNF362 JUN FOS ENSG00000271933 RPS3AP5 LRIT2 CCSER2 RPL12P29
GH10I084525 Enhancer 1 ENCODE 0.3 -33.6 -33612 3.6 ATF1 ARNT NEUROD1 DMAP1 ZBTB7B TCF12 ZNF766 GATA2 ELK1 FOS CCSER2 RPS3AP5 CACYBPP1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS3AP5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS3AP5 Gene

Genomic Locations for RPS3AP5 Gene
chr10:84,560,419-84,561,306
(GRCh38/hg38)
Size:
888 bases
Orientation:
Plus strand
chr10:86,320,175-86,321,062
(GRCh37/hg19)

Genomic View for RPS3AP5 Gene

Genes around RPS3AP5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP5 Gene

Proteins for RPS3AP5 Gene

Post-translational modifications for RPS3AP5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP5 Gene

Domains & Families for RPS3AP5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS3AP5 Gene

Function for RPS3AP5 Gene

Phenotypes From GWAS Catalog for RPS3AP5 Gene

Phenotypes for RPS3AP5 Gene

GenomeRNAi human phenotypes for RPS3AP5:
genes like me logo Genes that share phenotypes with RPS3AP5: view

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP5 Gene

Localization for RPS3AP5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP5 Gene

Pathways & Interactions for RPS3AP5 Gene

SuperPathways for RPS3AP5 Gene

No Data Available

Interacting Proteins for RPS3AP5 Gene

Gene Ontology (GO) - Biological Process for RPS3AP5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS3AP5 Gene

Drugs & Compounds for RPS3AP5 Gene

No Compound Related Data Available

Transcripts for RPS3AP5 Gene

mRNA/cDNA for RPS3AP5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP5 Gene

No ASD Table

Relevant External Links for RPS3AP5 Gene

GeneLoc Exon Structure for
RPS3AP5
ECgene alternative splicing isoforms for
RPS3AP5

Expression for RPS3AP5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS3AP5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS3AP5 Gene:

RPS3AP5
genes like me logo Genes that share expression patterns with RPS3AP5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP5 Gene

Orthologs for RPS3AP5 Gene

Evolution for RPS3AP5 Gene

ENSEMBL:
Gene Tree for RPS3AP5 (if available)
TreeFam:
Gene Tree for RPS3AP5 (if available)

No data available for Orthologs for RPS3AP5 Gene

Paralogs for RPS3AP5 Gene

No data available for Paralogs for RPS3AP5 Gene

Variants for RPS3AP5 Gene

Additional Variant Information for RPS3AP5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP5 Gene

Disorders for RPS3AP5 Gene

Additional Disease Information for RPS3AP5

Genetic Association Database
(GAD)

No disorders were found for RPS3AP5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS3AP5 Gene

Publications for RPS3AP5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie AG … Butte NF (PloS one 2012) 3 58

Products for RPS3AP5 Gene

Sources for RPS3AP5 Gene

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