Aliases for RPS3AP28 Gene

Aliases for RPS3AP28 Gene

  • RPS3A Pseudogene 28 2 3
  • Ribosomal Protein S3a Pseudogene 28 2 3
  • RPS3A_13_855 3

External Ids for RPS3AP28 Gene

Previous GeneCards Identifiers for RPS3AP28 Gene

  • GC07U902580
  • GC07M138176

Summaries for RPS3AP28 Gene

GeneCards Summary for RPS3AP28 Gene

RPS3AP28 (RPS3A Pseudogene 28) is a Pseudogene.

Additional gene information for RPS3AP28 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS3AP28 Gene

Genomics for RPS3AP28 Gene

GeneHancer (GH) Regulatory Elements for RPS3AP28 Gene

Promoters and enhancers for RPS3AP28 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07J138490 Enhancer 0.5 Ensembl 500.7 -0.9 -928 7 POLR2G FOXA2 RBM22 NCOA2 CEBPG ZNF18 ZNF507 AGO2 ZNF770 HMBOX1 ENSG00000234995 RPS3AP28 TRIM24 SVOPL HSALNG0061681
GH07J138500 Enhancer 0.4 Ensembl 0.4 -10.4 -10428 2.8 FOXA2 RBM22 AGO2 ZNF384 CEBPA TRIM24 HSALNG0061681 RPS3AP28
GH07J138514 Enhancer 0.4 Ensembl 0.4 -22.6 -22628 1.2 POLR2A RBM22 STAT1 SSRP1 AGO2 HSALNG0061681 TRIM24 ENSG00000252188 SVOPL ENSG00000201465 RPS3AP28
GH07J138497 Enhancer 0.3 Ensembl 0.4 -6.7 -6728 0.6 POLR2G RBM22 SVOPL TRIM24 RPS3AP28 HSALNG0061681
GH07J138504 Enhancer 0.3 Ensembl 0.4 -12.5 -12528 0.2 PAF1 TRIM24 HSALNG0061681 RPS3AP28
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS3AP28 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS3AP28 Gene

Genomic Locations for RPS3AP28 Gene
chr7:138,490,543-138,491,373
(GRCh38/hg38)
Size:
831 bases
Orientation:
Minus strand
chr7:138,175,288-138,176,118
(GRCh37/hg19)
Size:
831 bases
Orientation:
Minus strand

Genomic View for RPS3AP28 Gene

Genes around RPS3AP28 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP28 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP28 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP28 Gene

Proteins for RPS3AP28 Gene

Post-translational modifications for RPS3AP28 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP28 Gene

Domains & Families for RPS3AP28 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS3AP28 Gene

Function for RPS3AP28 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP28 Gene

Localization for RPS3AP28 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP28 Gene

Pathways & Interactions for RPS3AP28 Gene

PathCards logo

SuperPathways for RPS3AP28 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS3AP28 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS3AP28 Gene

Drugs & Compounds for RPS3AP28 Gene

No Compound Related Data Available

Transcripts for RPS3AP28 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP28 Gene

No ASD Table

Relevant External Links for RPS3AP28 Gene

GeneLoc Exon Structure for
RPS3AP28

No data available for mRNA/cDNA for RPS3AP28 Gene

Expression for RPS3AP28 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3AP28 Gene

genes like me logo Genes that share expression patterns with RPS3AP28: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP28 Gene

Orthologs for RPS3AP28 Gene

No data available for Orthologs and Evolution for RPS3AP28 Gene

Paralogs for RPS3AP28 Gene

No data available for Paralogs for RPS3AP28 Gene

Variants for RPS3AP28 Gene

Additional Variant Information for RPS3AP28 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP28

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP28 Gene

Disorders for RPS3AP28 Gene

No disorders were found for RPS3AP28 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP28 Gene

Publications for RPS3AP28 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54

No data available for Mastermind for RPS3AP28 Gene

Products for RPS3AP28 Gene

Sources for RPS3AP28 Gene