Aliases for RPS3AP10 Gene

Aliases for RPS3AP10 Gene

  • RPS3A Pseudogene 10 2 3 5
  • Ribosomal Protein S3a Pseudogene 10 2 3
  • RPS3A_2_114 3
  • RPS3AP10 5

External Ids for RPS3AP10 Gene

Previous GeneCards Identifiers for RPS3AP10 Gene

  • GC01P164259

Summaries for RPS3AP10 Gene

GeneCards Summary for RPS3AP10 Gene

RPS3AP10 (RPS3A Pseudogene 10) is a Pseudogene.

Additional gene information for RPS3AP10 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS3AP10 Gene

Genomics for RPS3AP10 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS3AP10 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J166032 Enhancer 0.4 Ensembl 0.4 +10.6 10611 1.2 YY1 NFIC NFIB HNF4A lnc-UCK2-5 RPS3AP10 FAM78B-AS1 FAM78B TMCO1
GH01J166040 Enhancer 0.2 Ensembl 0.4 +18.3 18310 0.6 RF00001-017 RNA5SP64 lnc-UCK2-5 RPS3AP10 FAM78B FAM78B-AS1 TMCO1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS3AP10 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS3AP10 Gene

Genomic Locations for RPS3AP10 Gene
chr1:166,022,190-166,023,075
(GRCh38/hg38)
Size:
886 bases
Orientation:
Plus strand
chr1:165,991,426-165,992,312
(GRCh37/hg19)
Size:
887 bases
Orientation:
Plus strand

Genomic View for RPS3AP10 Gene

Genes around RPS3AP10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS3AP10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS3AP10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS3AP10 Gene

Proteins for RPS3AP10 Gene

Post-translational modifications for RPS3AP10 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS3AP10 Gene

Domains & Families for RPS3AP10 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS3AP10 Gene

Function for RPS3AP10 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS3AP10 Gene

Localization for RPS3AP10 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS3AP10 Gene

Pathways & Interactions for RPS3AP10 Gene

PathCards logo

SuperPathways for RPS3AP10 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS3AP10 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS3AP10 Gene

Drugs & Compounds for RPS3AP10 Gene

No Compound Related Data Available

Transcripts for RPS3AP10 Gene

mRNA/cDNA for RPS3AP10 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS3AP10 Gene

No ASD Table

Relevant External Links for RPS3AP10 Gene

GeneLoc Exon Structure for
RPS3AP10

Expression for RPS3AP10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS3AP10 Gene

genes like me logo Genes that share expression patterns with RPS3AP10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS3AP10 Gene

Orthologs for RPS3AP10 Gene

Evolution for RPS3AP10 Gene

ENSEMBL:
Gene Tree for RPS3AP10 (if available)
TreeFam:
Gene Tree for RPS3AP10 (if available)

No data available for Orthologs for RPS3AP10 Gene

Paralogs for RPS3AP10 Gene

No data available for Paralogs for RPS3AP10 Gene

Variants for RPS3AP10 Gene

Additional Variant Information for RPS3AP10 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS3AP10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS3AP10 Gene

Disorders for RPS3AP10 Gene

No disorders were found for RPS3AP10 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS3AP10 Gene

Publications for RPS3AP10 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

Products for RPS3AP10 Gene

Sources for RPS3AP10 Gene