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Aliases for RPS2P5 Gene

Aliases for RPS2P5 Gene

  • Ribosomal Protein S2 Pseudogene 5 2 3
  • RPS2_20_1284 3
  • Bcm384 3

External Ids for RPS2P5 Gene

Previous GeneCards Identifiers for RPS2P5 Gene

  • GC12U900536
  • GC12P117169
  • GC12P118684

Summaries for RPS2P5 Gene

GeneCards Summary for RPS2P5 Gene

RPS2P5 (Ribosomal Protein S2 Pseudogene 5) is a Pseudogene.

Additional gene information for RPS2P5 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P5 Gene

Genomics for RPS2P5 Gene

GeneHancer (GH) Regulatory Elements for RPS2P5 Gene

Promoters and enhancers for RPS2P5 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I118246 Promoter 0.6 Ensembl 550.8 +0.1 140 0.4 ATF2 RPS2P5 GC12P118191 TAOK3
GH12I118058 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.8 -184.1 -184135 6.9 HDGF FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 YY1 POLR2B ZNF766 WSB2 VSIG10 RFC5 SUDS3 RPS2P5 GC12P118041 PIR34670
GH12I118236 Enhancer 0.9 Ensembl ENCODE 0.4 -8.1 -8120 2.8 PKNOX1 BACH1 EBF1 BMI1 IRF4 GATA3 ATF7 BCLAF1 IKZF2 RUNX3 PEBP1 SUDS3 RPS2P5 GC12P118191 TAOK3
GH12I118306 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 0.2 +61.8 61813 3.1 PKNOX1 BMI1 BATF KLF5 ZNF121 ATF7 ETV6 FOS BCLAF1 IKZF2 SUDS3 VSIG10 TAOK3 RPS2P5 GC12P118191
GH12I118328 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.2 +84.6 84553 3.4 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ARID2 NCOA1 MBD2 MEF2D SUDS3 TAOK3 PEBP1 RPS2P5 GC12P118191
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS2P5 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS2P5 Gene

Genomic Locations for RPS2P5 Gene
chr12:118,246,061-118,247,011
(GRCh38/hg38)
Size:
951 bases
Orientation:
Plus strand
chr12:118,683,866-118,684,816
(GRCh37/hg19)

Genomic View for RPS2P5 Gene

Genes around RPS2P5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P5 Gene

Proteins for RPS2P5 Gene

Post-translational modifications for RPS2P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P5 Gene

Domains & Families for RPS2P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P5 Gene

Function for RPS2P5 Gene

Phenotypes From GWAS Catalog for RPS2P5 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P5 Gene

Localization for RPS2P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P5 Gene

Pathways & Interactions for RPS2P5 Gene

SuperPathways for RPS2P5 Gene

No Data Available

Interacting Proteins for RPS2P5 Gene

Gene Ontology (GO) - Biological Process for RPS2P5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P5 Gene

Drugs & Compounds for RPS2P5 Gene

No Compound Related Data Available

Transcripts for RPS2P5 Gene

mRNA/cDNA for RPS2P5 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P5 Gene

No ASD Table

Relevant External Links for RPS2P5 Gene

GeneLoc Exon Structure for
RPS2P5
ECgene alternative splicing isoforms for
RPS2P5

Expression for RPS2P5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P5 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P5 Gene:

RPS2P5
genes like me logo Genes that share expression patterns with RPS2P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P5 Gene

Orthologs for RPS2P5 Gene

Evolution for RPS2P5 Gene

ENSEMBL:
Gene Tree for RPS2P5 (if available)
TreeFam:
Gene Tree for RPS2P5 (if available)

No data available for Orthologs for RPS2P5 Gene

Paralogs for RPS2P5 Gene

No data available for Paralogs for RPS2P5 Gene

Variants for RPS2P5 Gene

Additional Variant Information for RPS2P5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P5 Gene

Disorders for RPS2P5 Gene

Additional Disease Information for RPS2P5

Genetic Association Database
(GAD)
Human Genome Epidemiology Navigator
(HuGE)

No disorders were found for RPS2P5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P5 Gene

Publications for RPS2P5 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Single-nucleotide polymorphisms, acute rejection, and severity of tubulitis in kidney transplantation, accounting for center-to-center variation. (PMID: 21085059) Israni A … DeKAF Investigators (Transplantation 2010) 44 58
  3. RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination. (PMID: 29117863) Choudhury NR … Michlewski G (BMC biology 2017) 3

Products for RPS2P5 Gene

Sources for RPS2P5 Gene

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