Aliases for RPS2P42 Gene

Aliases for RPS2P42 Gene

  • Ribosomal Protein S2 Pseudogene 42 2 3
  • Ribosomal Protein S2 (RPS2) Pseudogene 5
  • RPS2_19_1214 3
  • AC092183.1 5

External Ids for RPS2P42 Gene

Previous GeneCards Identifiers for RPS2P42 Gene

  • GC12U901065
  • GC12P015593

Summaries for RPS2P42 Gene

GeneCards Summary for RPS2P42 Gene

RPS2P42 (Ribosomal Protein S2 Pseudogene 42) is a Pseudogene.

Additional gene information for RPS2P42 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS2P42 Gene

Genomics for RPS2P42 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS2P42 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12J015423 Enhancer 0.6 Ensembl 0.4 -15.7 -15703 0.4 ATF7 CEBPB ZNF184 CEBPG ATF4 SMARCA4 JUND ZNF518A SP7 ZEB2 PTPRO RPS2P42 piR-38580-058 RERG EPS8
GH12J015428 Enhancer 0.3 Ensembl 0.4 -10.8 -10803 1 TEAD4 HLF RPS2P42 piR-38580-058 RERG PTPRO EPS8
GH12J015446 Enhancer 0.3 ENCODE 0.4 +7.5 7518 0.2 FOS RPS2P42 piR-61945-088 RERG PTPRO EPS8
GH12J015416 Enhancer 0.3 Ensembl 0.4 -23.3 -23303 0.4 PKNOX1 ZNF24 PTPRO RPS2P42 piR-38580-058 RERG EPS8
GH12J015397 Enhancer 0.3 Ensembl 0.3 -41.5 -41503 0.4 NANOG PTPRO piR-38580-058 RPS2P42 RERG EPS8
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS2P42 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS2P42 Gene

Genomic Locations for RPS2P42 Gene
chr12:15,439,504-15,440,441
(GRCh38/hg38)
Size:
938 bases
Orientation:
Plus strand
chr12:15,592,438-15,593,384
(GRCh37/hg19)
Size:
947 bases
Orientation:
Plus strand

Genomic View for RPS2P42 Gene

Genes around RPS2P42 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P42 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P42 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P42 Gene

Proteins for RPS2P42 Gene

Post-translational modifications for RPS2P42 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P42 Gene

Domains & Families for RPS2P42 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS2P42 Gene

Function for RPS2P42 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P42 Gene

Localization for RPS2P42 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P42 Gene

Pathways & Interactions for RPS2P42 Gene

PathCards logo

SuperPathways for RPS2P42 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS2P42 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS2P42 Gene

Drugs & Compounds for RPS2P42 Gene

No Compound Related Data Available

Transcripts for RPS2P42 Gene

mRNA/cDNA for RPS2P42 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P42 Gene

No ASD Table

Relevant External Links for RPS2P42 Gene

GeneLoc Exon Structure for
RPS2P42

Expression for RPS2P42 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS2P42 Gene

genes like me logo Genes that share expression patterns with RPS2P42: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P42 Gene

Orthologs for RPS2P42 Gene

Evolution for RPS2P42 Gene

ENSEMBL:
Gene Tree for RPS2P42 (if available)
TreeFam:
Gene Tree for RPS2P42 (if available)

No data available for Orthologs for RPS2P42 Gene

Paralogs for RPS2P42 Gene

No data available for Paralogs for RPS2P42 Gene

Variants for RPS2P42 Gene

Additional Variant Information for RPS2P42 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P42

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P42 Gene

Disorders for RPS2P42 Gene

No disorders were found for RPS2P42 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS2P42 Gene

Publications for RPS2P42 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS2P42 Gene

Products for RPS2P42 Gene

Sources for RPS2P42 Gene