Aliases for RPS2P38 Gene

Aliases for RPS2P38 Gene

  • Ribosomal Protein S2 Pseudogene 38 2 3
  • RPS2_18_1126 3

External Ids for RPS2P38 Gene

Previous GeneCards Identifiers for RPS2P38 Gene

  • GC11P023480

Summaries for RPS2P38 Gene

GeneCards Summary for RPS2P38 Gene

RPS2P38 (Ribosomal Protein S2 Pseudogene 38) is a Pseudogene.

Additional gene information for RPS2P38 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS2P38 Gene

Genomics for RPS2P38 Gene

GeneHancer (GH) Regulatory Elements for RPS2P38 Gene

Promoters and enhancers for RPS2P38 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J023490 Enhancer 0.4 ENCODE 0.3 -29.2 -29159 1.2 EP300 SP1 NANOG RBBP5 lnc-GAS2-8 THAP12P4 RPS2P38
GH11J023498 Enhancer 0.2 Ensembl 0.4 -21.9 -21894 0.4 lnc-GAS2-8 RPS2P38 THAP12P4
GH11J023493 Enhancer 0.2 Ensembl 0.3 -26.8 -26794 0.2 lnc-GAS2-8 THAP12P4 RPS2P38
GH11J023480 Enhancer 0.2 ENCODE 0.3 -39.4 -39385 0.2 lnc-GAS2-8 THAP12P4 RPS2P38
GH11J023484 Enhancer 0.2 Ensembl 0.3 -36.1 -36094 0.4 THAP12P4 lnc-GAS2-8 RPS2P38
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS2P38 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS2P38 Gene

Genomic Locations for RPS2P38 Gene
chr11:23,520,295-23,521,239
(GRCh38/hg38)
Size:
945 bases
Orientation:
Plus strand
chr11:23,541,841-23,542,785
(GRCh37/hg19)
Size:
945 bases
Orientation:
Plus strand

Genomic View for RPS2P38 Gene

Genes around RPS2P38 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P38 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P38 Gene

Proteins for RPS2P38 Gene

Post-translational modifications for RPS2P38 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P38 Gene

Domains & Families for RPS2P38 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS2P38 Gene

Function for RPS2P38 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P38 Gene

Localization for RPS2P38 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P38 Gene

Pathways & Interactions for RPS2P38 Gene

PathCards logo

SuperPathways for RPS2P38 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS2P38 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS2P38 Gene

Drugs & Compounds for RPS2P38 Gene

No Compound Related Data Available

Transcripts for RPS2P38 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P38 Gene

No ASD Table

Relevant External Links for RPS2P38 Gene

GeneLoc Exon Structure for
RPS2P38

No data available for mRNA/cDNA for RPS2P38 Gene

Expression for RPS2P38 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS2P38 Gene

genes like me logo Genes that share expression patterns with RPS2P38: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P38 Gene

Orthologs for RPS2P38 Gene

No data available for Orthologs and Evolution for RPS2P38 Gene

Paralogs for RPS2P38 Gene

No data available for Paralogs for RPS2P38 Gene

Variants for RPS2P38 Gene

Additional Variant Information for RPS2P38 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P38

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P38 Gene

Disorders for RPS2P38 Gene

Additional Disease Information for RPS2P38

Genetic Association Database
(GAD)

No disorders were found for RPS2P38 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS2P38 Gene

Publications for RPS2P38 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 41 54
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 41 54
  4. Genetic correlates of brain aging on MRI and cognitive test measures: a genome-wide association and linkage analysis in the Framingham Study. (PMID: 17903297) Seshadri S … Wolf PA (BMC medical genetics 2007) 41 54

Products for RPS2P38 Gene

Sources for RPS2P38 Gene