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Aliases for RPS2P20 Gene

Aliases for RPS2P20 Gene

  • Ribosomal Protein S2 Pseudogene 20 2 3
  • RPS2_7_524 3
  • AC097658.1 5

External Ids for RPS2P20 Gene

Previous GeneCards Identifiers for RPS2P20 Gene

  • GC04M144490
  • GC04M144271

Summaries for RPS2P20 Gene

GeneCards Summary for RPS2P20 Gene

RPS2P20 (Ribosomal Protein S2 Pseudogene 20) is a Pseudogene.

Additional gene information for RPS2P20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P20 Gene

Genomics for RPS2P20 Gene

GeneHancer (GH) Regulatory Elements for RPS2P20 Gene

Promoters and enhancers for RPS2P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I143349 Promoter/Enhancer 1 FANTOM5 Ensembl 550.8 +0.0 8 0.7 ZNF202 ZBTB33 RPS2P20 MIR3139 GAB1
GH04I143343 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.8 +3.9 3852 5.8 PKNOX1 FOXA2 ARNT FEZF1 TCF12 GATA2 FOS NCOA1 ZNF623 ZNF592 MIR3139 RPS2P20 GAB1
GH04I143351 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.4 -7.2 -7216 11.6 FOXA2 FEZF1 ATF7 FOS RUNX3 CAVIN1 JUNB ZNF592 MEF2D GMEB1 USP38 SMARCA5 GAB1 RPS2P20 RPSAP36
GH04I143373 Enhancer 1.3 Ensembl ENCODE dbSUPER 0.3 -28.7 -28666 10.6 PKNOX1 FOXA2 ARID4B FEZF1 ZNF48 TCF12 ZNF143 ATF7 RUNX3 RXRA GAB1 USP38 RPS2P20 RPSAP36
GH04I143372 Enhancer 0.9 ENCODE dbSUPER 0.3 -22.5 -22503 0.2 BACH1 PAX8 EBF1 BMI1 BATF IRF4 RELA NFATC1 ATF7 ZSCAN29 RPS2P20 GAB1 RPSAP36
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS2P20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS2P20 Gene

Genomic Locations for RPS2P20 Gene
chr4:143,349,229-143,350,140
(GRCh38/hg38)
Size:
912 bases
Orientation:
Minus strand
chr4:144,270,382-144,271,293
(GRCh37/hg19)

Genomic View for RPS2P20 Gene

Genes around RPS2P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P20 Gene

Proteins for RPS2P20 Gene

Post-translational modifications for RPS2P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P20 Gene

Domains & Families for RPS2P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P20 Gene

Function for RPS2P20 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P20 Gene

Localization for RPS2P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P20 Gene

Pathways & Interactions for RPS2P20 Gene

SuperPathways for RPS2P20 Gene

No Data Available

Interacting Proteins for RPS2P20 Gene

Gene Ontology (GO) - Biological Process for RPS2P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P20 Gene

Drugs & Compounds for RPS2P20 Gene

No Compound Related Data Available

Transcripts for RPS2P20 Gene

mRNA/cDNA for RPS2P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P20 Gene

No ASD Table

Relevant External Links for RPS2P20 Gene

GeneLoc Exon Structure for
RPS2P20
ECgene alternative splicing isoforms for
RPS2P20

Expression for RPS2P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P20 Gene:

RPS2P20
genes like me logo Genes that share expression patterns with RPS2P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P20 Gene

Orthologs for RPS2P20 Gene

Evolution for RPS2P20 Gene

ENSEMBL:
Gene Tree for RPS2P20 (if available)
TreeFam:
Gene Tree for RPS2P20 (if available)

No data available for Orthologs for RPS2P20 Gene

Paralogs for RPS2P20 Gene

No data available for Paralogs for RPS2P20 Gene

Variants for RPS2P20 Gene

Additional Variant Information for RPS2P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS2P20 Gene

Disorders for RPS2P20 Gene

No disorders were found for RPS2P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS2P20 Gene

Publications for RPS2P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS2P20 Gene

Sources for RPS2P20 Gene

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