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Aliases for RPS2P17 Gene

Aliases for RPS2P17 Gene

  • Ribosomal Protein S2 Pseudogene 17 2 3
  • RPS2_6_247 3
  • AC022210.1 5

External Ids for RPS2P17 Gene

Previous GeneCards Identifiers for RPS2P17 Gene

  • GC02P084998
  • GC02P085143

Summaries for RPS2P17 Gene

GeneCards Summary for RPS2P17 Gene

RPS2P17 (Ribosomal Protein S2 Pseudogene 17) is a Pseudogene.

Additional gene information for RPS2P17 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS2P17 Gene

Genomics for RPS2P17 Gene

GeneHancer (GH) Regulatory Elements for RPS2P17 Gene

Promoters and enhancers for RPS2P17 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I084887 Enhancer 1.5 FANTOM5 Ensembl ENCODE dbSUPER 12.1 -26.7 -26682 3.2 PKNOX1 FOXA2 YBX1 ZBTB40 BATF IRF4 ATF7 ETV6 IKZF2 RUNX3 LOC105374837 RPS2P17 TRABD2A TMSB10 GC02P084898
GH02I084956 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 11.3 +43.1 43114 4.7 FOXA2 SIN3A FEZF1 GTF3C2 SLC30A9 GLIS2 E2F8 ATF7 FOS DEK RPS2P17 TRABD2A GC02M084965 LOC105374838 GC02M084928 GC02M084958
GH02I084963 Enhancer 1.4 Ensembl ENCODE dbSUPER 10.8 +48.7 48728 2.3 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 SLC30A9 ATF7 FOS RPS2P17 TRABD2A KCMF1 GC02M084965 LOC105374838 GC02M084928 GC02M084958
GH02I085275 Enhancer 1.3 VISTA FANTOM5 Ensembl ENCODE dbSUPER 9.7 +361.7 361736 3.7 RNF2 POLR2A RCOR1 CHD2 TCF7L1 RNU6-674P RPS2P17 TRABD2A SH2D6 LOC100996506 ATOH8 TMEM150A TMSB10 ENSG00000230299
GH02I084856 Enhancer 1.1 Ensembl ENCODE dbSUPER 10.9 -58.6 -58575 0.7 ESRRA KLF1 ATF1 FOXA2 BACH1 ZBTB40 FOSL1 CTBP1 MTA3 VEZF1 GC02P084858 TRABD2A RPS2P17 ENSG00000276362
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS2P17 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS2P17 Gene

Genomic Locations for RPS2P17 Gene
chr2:84,915,763-84,916,711
(GRCh38/hg38)
Size:
949 bases
Orientation:
Plus strand
chr2:85,142,887-85,143,835
(GRCh37/hg19)

Genomic View for RPS2P17 Gene

Genes around RPS2P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS2P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS2P17 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS2P17 Gene

Proteins for RPS2P17 Gene

Post-translational modifications for RPS2P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS2P17 Gene

Domains & Families for RPS2P17 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS2P17 Gene

Function for RPS2P17 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS2P17 Gene

Localization for RPS2P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS2P17 Gene

Pathways & Interactions for RPS2P17 Gene

SuperPathways for RPS2P17 Gene

No Data Available

Interacting Proteins for RPS2P17 Gene

Gene Ontology (GO) - Biological Process for RPS2P17 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS2P17 Gene

Drugs & Compounds for RPS2P17 Gene

No Compound Related Data Available

Transcripts for RPS2P17 Gene

mRNA/cDNA for RPS2P17 Gene

(19) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS2P17 Gene

No ASD Table

Relevant External Links for RPS2P17 Gene

GeneLoc Exon Structure for
RPS2P17
ECgene alternative splicing isoforms for
RPS2P17

Expression for RPS2P17 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS2P17 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS2P17 Gene:

RPS2P17
genes like me logo Genes that share expression patterns with RPS2P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS2P17 Gene

Orthologs for RPS2P17 Gene

Evolution for RPS2P17 Gene

ENSEMBL:
Gene Tree for RPS2P17 (if available)
TreeFam:
Gene Tree for RPS2P17 (if available)

No data available for Orthologs for RPS2P17 Gene

Paralogs for RPS2P17 Gene

No data available for Paralogs for RPS2P17 Gene

Variants for RPS2P17 Gene

Variation tolerance for RPS2P17 Gene

Gene Damage Index Score: 7.43; 81.93% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for RPS2P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS2P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for RPS2P17 Gene

Disorders for RPS2P17 Gene

No disorders were found for RPS2P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS2P17 Gene

Publications for RPS2P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS2P17 Gene

Sources for RPS2P17 Gene

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