Aliases for RPS29P21 Gene

Aliases for RPS29P21 Gene

  • Ribosomal Protein S29 Pseudogene 21 2 3 5
  • RPS29_16_1562 3
  • RPS29P21 5

External Ids for RPS29P21 Gene

Previous GeneCards Identifiers for RPS29P21 Gene

  • GC17P055345
  • GC17P057990

Summaries for RPS29P21 Gene

GeneCards Summary for RPS29P21 Gene

RPS29P21 (Ribosomal Protein S29 Pseudogene 21) is a Pseudogene.

Additional gene information for RPS29P21 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS29P21 Gene

Genomics for RPS29P21 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS29P21 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH17J059891 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE CraniofacialAtlas 0.4 -18.9 -18874 3.4 GATAD2A ATF7 PRDM10 REST ZNF629 TFE3 SIX5 SOX13 IKZF1 NFKBIZ TUBD1 RPS6KB1 SMG8 HEATR6 PPM1D NDUFB8P2 RPS29P21 ENSG00000267318
GH17J059914 Enhancer 0.5 ENCODE 0.7 +2.3 2308 0.2 CTCF REST RAD21 TRIM22 SMC3 NFXL1 ZNF654 ARID3A DACH1 RPS29P21 NONHSAG021170.2 RPS6KB1 ENSG00000267318
GH17J059899 Enhancer 0.7 ENCODE 0.4 -12.9 -12872 0.2 PRDM10 ZNF629 SIX5 PKNOX1 DPF2 CTCF ZNF766 ZNF524 OSR2 ZNF580 RNFT1-DT RNU6-450P MIR21 PTRH2 VMP1 HEATR6 ENSG00000275860 RPS6KB1 RPS29P21 ENSG00000267318
GH17J059905 Enhancer 0.4 Ensembl 0.4 -7.1 -7066 0.2 NFXL1 GABPB1 TEAD3 ZNF121 RPS29P21 RPS6KB1 ENSG00000267318
GH17J059903 Enhancer 0.4 Ensembl 0.4 -8.5 -8466 0.2 NFXL1 ZNF362 ZNF83 RPS29P21 RPS6KB1 ENSG00000267318
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS29P21 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS29P21 Gene

Genomic Locations for RPS29P21 Gene
chr17:59,912,167-59,912,447
(GRCh38/hg38)
Size:
281 bases
Orientation:
Plus strand
chr17:57,989,528-57,989,815
(GRCh37/hg19)
Size:
288 bases
Orientation:
Plus strand

Genomic View for RPS29P21 Gene

Genes around RPS29P21 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P21 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P21 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS29P21 Gene

Proteins for RPS29P21 Gene

Post-translational modifications for RPS29P21 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P21 Gene

Domains & Families for RPS29P21 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS29P21 Gene

Function for RPS29P21 Gene

Phenotypes From GWAS Catalog for RPS29P21 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P21 Gene

Localization for RPS29P21 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS29P21 Gene

Pathways & Interactions for RPS29P21 Gene

PathCards logo

SuperPathways for RPS29P21 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS29P21 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS29P21 Gene

Drugs & Compounds for RPS29P21 Gene

No Compound Related Data Available

Transcripts for RPS29P21 Gene

mRNA/cDNA for RPS29P21 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P21 Gene

No ASD Table

Relevant External Links for RPS29P21 Gene

GeneLoc Exon Structure for
RPS29P21

Expression for RPS29P21 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS29P21 Gene

genes like me logo Genes that share expression patterns with RPS29P21: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS29P21 Gene

Orthologs for RPS29P21 Gene

Evolution for RPS29P21 Gene

ENSEMBL:
Gene Tree for RPS29P21 (if available)
TreeFam:
Gene Tree for RPS29P21 (if available)

No data available for Orthologs for RPS29P21 Gene

Paralogs for RPS29P21 Gene

No data available for Paralogs for RPS29P21 Gene

Variants for RPS29P21 Gene

Additional Variant Information for RPS29P21 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P21

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P21 Gene

Disorders for RPS29P21 Gene

No disorders were found for RPS29P21 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P21 Gene

Publications for RPS29P21 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS29P21 Gene

Products for RPS29P21 Gene

Sources for RPS29P21 Gene