Free for academic non-profit institutions. Other users need a Commercial license

Aliases for RPS29P20 Gene

Aliases for RPS29P20 Gene

  • Ribosomal Protein S29 Pseudogene 20 2 3 5
  • RPS29_15_1116 3

External Ids for RPS29P20 Gene

Previous GeneCards Identifiers for RPS29P20 Gene

  • GC11U901291

Summaries for RPS29P20 Gene

GeneCards Summary for RPS29P20 Gene

RPS29P20 (Ribosomal Protein S29 Pseudogene 20) is a Pseudogene.

Additional gene information for RPS29P20 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS29P20 Gene

Genomics for RPS29P20 Gene

GeneHancer (GH) Regulatory Elements for RPS29P20 Gene

Promoters and enhancers for RPS29P20 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I004018 Enhancer 0.3 ENCODE 550.8 +0.1 121 1.2 TCF7L2 GC11M004011 RPS29P20 ENSG00000206976 STIM1 LOC105376527 ENSG00000229368 RRM1
GH11I004056 Enhancer 1.1 Ensembl ENCODE 0.3 +40.2 40156 4.3 PKNOX1 FOXA2 ARID4B BATF THRB ZSCAN9 RAD21 RARA ATF7 ETV6 RRM1 ENSG00000206976 STIM1 ENSG00000229368 LOC105376527 RPS29P20
GH11I004044 Enhancer 1 Ensembl ENCODE 0.3 +26.0 26016 1.8 FOXA2 ARID4B RAD21 YY1 RXRA REST NR2F2 TGIF2 NFIL3 ATF4 RRM1 RPS29P20 STIM1
GH11I004024 Enhancer 0.7 Ensembl ENCODE 0.4 +6.9 6944 2.6 JUN HMBOX1 RCOR1 NR2F2 CHD2 STIM1 RPS29P20 RRM1
GH11I004089 Enhancer 0.9 FANTOM5 ENCODE 0.2 +72.2 72171 3.6 CTCF PKNOX1 ZBTB11 ZBTB40 GABPA ZNF366 GABPB1 PRDM1 SALL1 RRM1 STIM1 RPS29P20
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS29P20 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS29P20 Gene

Genomic Locations for RPS29P20 Gene
chr11:4,018,948-4,019,118
(GRCh38/hg38)
Size:
171 bases
Orientation:
Plus strand
chr11:4,040,178-4,040,348
(GRCh37/hg19)

Genomic View for RPS29P20 Gene

Genes around RPS29P20 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P20 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P20 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS29P20 Gene

Proteins for RPS29P20 Gene

Post-translational modifications for RPS29P20 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P20 Gene

Domains & Families for RPS29P20 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS29P20 Gene

Function for RPS29P20 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P20 Gene

Localization for RPS29P20 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS29P20 Gene

Pathways & Interactions for RPS29P20 Gene

SuperPathways for RPS29P20 Gene

No Data Available

Interacting Proteins for RPS29P20 Gene

Gene Ontology (GO) - Biological Process for RPS29P20 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS29P20 Gene

Drugs & Compounds for RPS29P20 Gene

No Compound Related Data Available

Transcripts for RPS29P20 Gene

mRNA/cDNA for RPS29P20 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P20 Gene

No ASD Table

Relevant External Links for RPS29P20 Gene

GeneLoc Exon Structure for
RPS29P20
ECgene alternative splicing isoforms for
RPS29P20

Expression for RPS29P20 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS29P20 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS29P20 Gene:

RPS29P20
genes like me logo Genes that share expression patterns with RPS29P20: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS29P20 Gene

Orthologs for RPS29P20 Gene

Evolution for RPS29P20 Gene

ENSEMBL:
Gene Tree for RPS29P20 (if available)
TreeFam:
Gene Tree for RPS29P20 (if available)

No data available for Orthologs for RPS29P20 Gene

Paralogs for RPS29P20 Gene

No data available for Paralogs for RPS29P20 Gene

Variants for RPS29P20 Gene

Additional Variant Information for RPS29P20 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P20

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P20 Gene

Disorders for RPS29P20 Gene

No disorders were found for RPS29P20 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P20 Gene

Publications for RPS29P20 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS29P20 Gene

Sources for RPS29P20 Gene

Content
Loading form....