RPS29P19 Gene (Pseudogene)

Ribosomal Protein S29 Pseudogene 19

GC11M113751
GIFtS:
5
See more...

Aliases for RPS29P19 Gene

Aliases for RPS29P19 Gene

  • Ribosomal Protein S29 Pseudogene 19 2 3 5
  • RPS29_4_1178 3
  • RPS29P19 5

External Ids for RPS29P19 Gene

Previous GeneCards Identifiers for RPS29P19 Gene

  • GC11U901289
  • GC11M113622

Summaries for RPS29P19 Gene

GeneCards Summary for RPS29P19 Gene

RPS29P19 (Ribosomal Protein S29 Pseudogene 19) is a Pseudogene.

Additional gene information for RPS29P19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS29P19 Gene

Genomics for RPS29P19 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPS29P19 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH11J113725 Enhancer 0.9 Ensembl ENCODE 0.4 +22.5 22485 6.8 CTCF RFX1 IKZF1 JUND PKNOX1 REST RAD21 SMC3 FOSL1 EHMT2 ENSG00000255129 TTC12 LRRC37A13P RNU6-1107P TMPRSS5 ATF4P4 USP28 DRD2 lnc-CLDN25-5 MTRF1LP1
GH11J113723 Enhancer 0.5 Ensembl 0.3 +27.9 27885 0.4 TCF7 FOXA2 FOSL2 BCL6 KDM1A TEAD3 ARID3A EZH2 LRRC37A13P RNU6-1107P MTRF1LP1 TMPRSS5 lnc-CLDN25-5 RPS29P19 ZW10 lnc-ZW10-1
GH11J113724 Enhancer 0.5 Ensembl 0.3 +27.2 27186 0.6 SOX13 TCF7 POLR2A MAFK SMARCA4 EZH2 RNU6-1107P TMPRSS5 MTRF1LP1 lnc-CLDN25-5 RPS29P19 ZW10 lnc-ZW10-1
GH11J113721 Enhancer 0.3 Ensembl 0.3 +29.2 29185 1 BCL6 ZBTB40 TMPRSS5 MTRF1LP1 lnc-CLDN25-5 RPS29P19 ZW10 lnc-ZW10-1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS29P19 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS29P19 Gene

Genomic Locations for RPS29P19 Gene
chr11:113,751,116-113,751,286
(GRCh38/hg38)
Size:
171 bases
Orientation:
Minus strand
chr11:113,621,838-113,622,008
(GRCh37/hg19)
Size:
171 bases
Orientation:
Minus strand

Genomic View for RPS29P19 Gene

Genes around RPS29P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS29P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS29P19 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS29P19 Gene

Proteins for RPS29P19 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS29P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS29P19 Gene

Domains & Families for RPS29P19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS29P19 Gene

Function for RPS29P19 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS29P19 Gene

Localization for RPS29P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS29P19 Gene

Pathways & Interactions for RPS29P19 Gene

PathCards logo

SuperPathways for RPS29P19 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS29P19 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS29P19 Gene

Drugs & Compounds for RPS29P19 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS29P19 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for RPS29P19 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS29P19 Gene

No ASD Table

Relevant External Links for RPS29P19 Gene

GeneLoc Exon Structure for
RPS29P19

Expression for RPS29P19 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS29P19 Gene

mRNA expression in normal human tissues for RPS29P19 Gene
mRNA expression by GTEx for RPS29P19 Gene
genes like me logo Genes that share expression patterns with RPS29P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS29P19 Gene

Orthologs for RPS29P19 Gene

Evolution for RPS29P19 Gene

ENSEMBL:
Gene Tree for RPS29P19 (if available)
TreeFam:
Gene Tree for RPS29P19 (if available)

No data available for Orthologs for RPS29P19 Gene

Paralogs for RPS29P19 Gene

No data available for Paralogs for RPS29P19 Gene

Variants for RPS29P19 Gene

Additional Variant Information for RPS29P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS29P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS29P19 Gene

Disorders for RPS29P19 Gene

No disorders were found for RPS29P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS29P19 Gene

Publications for RPS29P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS29P19 Gene

Products for RPS29P19 Gene

Sources for RPS29P19 Gene