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Aliases for RPS28P2 Gene

Aliases for RPS28P2 Gene

  • Ribosomal Protein S28 Pseudogene 2 2 3
  • RPS28_1_163 3
  • AC104333.2 5

External Ids for RPS28P2 Gene

Previous GeneCards Identifiers for RPS28P2 Gene

  • GC01U902289
  • GC01M213029

Summaries for RPS28P2 Gene

GeneCards Summary for RPS28P2 Gene

RPS28P2 (Ribosomal Protein S28 Pseudogene 2) is a Pseudogene.

Additional gene information for RPS28P2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS28P2 Gene

Genomics for RPS28P2 Gene

GeneHancer (GH) Regulatory Elements for RPS28P2 Gene

Promoters and enhancers for RPS28P2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I212852 Enhancer 0.5 ENCODE 550.8 +1.7 1714 1.4 SOX5 SOX13 ATF3 NFIA FOSL2 REST HNF4A GC01P212852 RPS28P2 ENSG00000235182 TATDN3 SPATA45 FLVCR1-AS1 GC01M212767 GC01P212844
GH01I212789 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE 11.8 +63.8 63769 4.4 MLX ZFP64 FEZF1 DMAP1 IRF4 YY1 SLC30A9 ZNF213 E2F8 ZNF143 TATDN3 NSL1 FLVCR1 FLVCR1-AS1 ANGEL2 RPL21P28 ENSG00000235182 RPS28P2 VASH2 BATF3
GH01I212819 Enhancer 1 FANTOM5 Ensembl ENCODE 12.6 +35.6 35601 1.1 ZNF217 SRF PKNOX1 NR2F1 IKZF1 BATF IKZF2 RELA FLVCR1-AS1 ENSG00000235182 RPS28P2 FLVCR1 TATDN3 VASH2 BATF3 RPS5P4 GC01M212767
GH01I212827 Enhancer 0.8 ENCODE 13.4 +27.3 27297 2.1 FOXA2 MLX ARID4B THRB RARA CREM MIXL1 HMG20B PPARG KAT8 FLVCR1-AS1 ENSG00000235182 RPS28P2 FLVCR1 TATDN3 VASH2 BATF3 GC01P212825 GC01P212844 GC01M212767
GH01I212995 Enhancer 0.8 ENCODE 11.2 -140.3 -140298 0.1 PKNOX1 RB1 ARNT RAD21 RFX5 CHAMP1 NCOA2 ARID2 ZNF143 ZNF391 VASH2 FLVCR1 FLVCR1-AS1 RPS28P2 ENSG00000235182 BATF3 ANGEL2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS28P2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS28P2 Gene

Genomic Locations for RPS28P2 Gene
chr1:212,855,169-212,855,366
(GRCh38/hg38)
Size:
198 bases
Orientation:
Minus strand
chr1:213,028,511-213,028,708
(GRCh37/hg19)

Genomic View for RPS28P2 Gene

Genes around RPS28P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS28P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS28P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS28P2 Gene

Proteins for RPS28P2 Gene

Post-translational modifications for RPS28P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS28P2 Gene

Domains & Families for RPS28P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS28P2 Gene

Function for RPS28P2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS28P2 Gene

Localization for RPS28P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS28P2 Gene

Pathways & Interactions for RPS28P2 Gene

SuperPathways for RPS28P2 Gene

No Data Available

Interacting Proteins for RPS28P2 Gene

Gene Ontology (GO) - Biological Process for RPS28P2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS28P2 Gene

Drugs & Compounds for RPS28P2 Gene

No Compound Related Data Available

Transcripts for RPS28P2 Gene

mRNA/cDNA for RPS28P2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS28P2 Gene

No ASD Table

Relevant External Links for RPS28P2 Gene

GeneLoc Exon Structure for
RPS28P2
ECgene alternative splicing isoforms for
RPS28P2

Expression for RPS28P2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS28P2 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS28P2 Gene:

RPS28P2
genes like me logo Genes that share expression patterns with RPS28P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS28P2 Gene

Orthologs for RPS28P2 Gene

Evolution for RPS28P2 Gene

ENSEMBL:
Gene Tree for RPS28P2 (if available)
TreeFam:
Gene Tree for RPS28P2 (if available)

No data available for Orthologs for RPS28P2 Gene

Paralogs for RPS28P2 Gene

No data available for Paralogs for RPS28P2 Gene

Variants for RPS28P2 Gene

Additional Variant Information for RPS28P2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS28P2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS28P2 Gene

Disorders for RPS28P2 Gene

No disorders were found for RPS28P2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS28P2 Gene

Publications for RPS28P2 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS28P2 Gene

Sources for RPS28P2 Gene

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