Aliases for RPS27P6 Gene

Aliases for RPS27P6 Gene

  • Ribosomal Protein S27 Pseudogene 6 2 3
  • RPS27_2_83 3

External Ids for RPS27P6 Gene

Previous GeneCards Identifiers for RPS27P6 Gene

  • GC01P109376
  • GC01P109573

Summaries for RPS27P6 Gene

GeneCards Summary for RPS27P6 Gene

RPS27P6 (Ribosomal Protein S27 Pseudogene 6) is a Pseudogene.

Additional gene information for RPS27P6 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS27P6 Gene

Genomics for RPS27P6 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS27P6 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J109029 Enhancer 0.5 FANTOM5 Ensembl 600.7 +0.1 52 0.2 ZBTB8A ENSG00000228665 RPS27P6 lnc-TMEM167B-3 FJ601684-025 WDR47 AKNAD1 CLCC1
GH01J109028 Enhancer 0.5 Ensembl 0.7 -2.1 -2130 3.4 CTCF ZBTB11 RAD21 ZNF664 ZNF362 ZNF384 CBFA2T3 ZBTB8A PRDM12 WDR47 GPSM2 RPS27P6 RF00017-286 AKNAD1 CLCC1
GH01J109025 Enhancer 0.5 Ensembl 0.7 -4.1 -4130 0.2 ZBTB33 PKNOX1 ZEB1 BCOR PRDM6 ETV1 MEIS2 ATF2 CBFA2T3 RF00017-286 RPS27P6 WDR47 AKNAD1 CLCC1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS27P6 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS27P6 Gene

Genomic Locations for RPS27P6 Gene
chr1:109,030,031-109,030,376
(GRCh38/hg38)
Size:
346 bases
Orientation:
Plus strand
chr1:109,572,654-109,572,998
(GRCh37/hg19)
Size:
345 bases
Orientation:
Plus strand

Genomic View for RPS27P6 Gene

Genes around RPS27P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P6 Gene

Proteins for RPS27P6 Gene

Post-translational modifications for RPS27P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P6 Gene

Domains & Families for RPS27P6 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS27P6 Gene

Function for RPS27P6 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P6 Gene

Localization for RPS27P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27P6 Gene

Pathways & Interactions for RPS27P6 Gene

PathCards logo

SuperPathways for RPS27P6 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS27P6 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS27P6 Gene

Drugs & Compounds for RPS27P6 Gene

No Compound Related Data Available

Transcripts for RPS27P6 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P6 Gene

No ASD Table

Relevant External Links for RPS27P6 Gene

GeneLoc Exon Structure for
RPS27P6

No data available for mRNA/cDNA for RPS27P6 Gene

Expression for RPS27P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS27P6 Gene

genes like me logo Genes that share expression patterns with RPS27P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P6 Gene

Orthologs for RPS27P6 Gene

No data available for Orthologs and Evolution for RPS27P6 Gene

Paralogs for RPS27P6 Gene

No data available for Paralogs for RPS27P6 Gene

Variants for RPS27P6 Gene

Additional Variant Information for RPS27P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P6 Gene

Disorders for RPS27P6 Gene

No disorders were found for RPS27P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27P6 Gene

Publications for RPS27P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS27P6 Gene

Products for RPS27P6 Gene

Sources for RPS27P6 Gene