Aliases for RPS27P19 Gene

Aliases for RPS27P19 Gene

  • Ribosomal Protein S27 Pseudogene 19 2 3
  • RPS27_7_1180 3

External Ids for RPS27P19 Gene

Previous GeneCards Identifiers for RPS27P19 Gene

  • GC11M116413
  • GC11M116907

Summaries for RPS27P19 Gene

GeneCards Summary for RPS27P19 Gene

RPS27P19 (Ribosomal Protein S27 Pseudogene 19) is a Pseudogene.

Additional gene information for RPS27P19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS27P19 Gene

Genomics for RPS27P19 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS27P19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11J117033 Enhancer 0.6 Ensembl dbSUPER 600.7 +0.6 585 0.2 ZNF24 OSR2 ZBTB6 DACH1 ENSG00000234268 RPS27P19 lnc-PCSK7-3 SIK3 ENSG00000224077 RNY4P6 RF00019-017 APOA1
GH11J117037 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -5.8 -5815 12.2 ZNF629 SOX13 SP1 ZNF600 SOX6 CEBPA SCRT2 ZBTB44 CEBPB ZNF140 RNF214 BUD13 ENSG00000254851 APOA1 CEP164 ENSG00000224077 SIK3 TAGLN APOA1-AS APOA4
GH11J117062 Enhancer 0.9 ENCODE dbSUPER 0.3 -27.5 -27484 2.4 BACH1 PRDM1 RELA IKZF2 TRIM22 EED ARID3A PAX8 RELB ZXDB APOA1 ENSG00000254851 RF00998-025 RPS27P19 SIK3
GH11J117058 Enhancer 0.8 ENCODE dbSUPER 0.4 -23.1 -23050 1.2 RFX5 JUND CEBPB FOS CREB1 ZBTB17 BHLHE40 ATF4 ATF3 PRDM6 ENSG00000254851 APOA1 SIK3 ENSG00000224077 APOA5 ZPR1 RF00998-025 RPS27P19
GH11J117050 Enhancer 0.4 Ensembl dbSUPER 0.4 -16.0 -16015 5.4 ZNF121 APOA1 ENSG00000254851 SIK3 ENSG00000224077 BUD13 ENSG00000226645 SIDT2 RF00998-025 RPS27P19
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS27P19 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS27P19 Gene

Genomic Locations for RPS27P19 Gene
chr11:117,035,740-117,036,086
(GRCh38/hg38)
Size:
347 bases
Orientation:
Minus strand
chr11:116,906,456-116,906,801
(GRCh37/hg19)
Size:
346 bases
Orientation:
Minus strand

Genomic View for RPS27P19 Gene

Genes around RPS27P19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27P19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27P19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27P19 Gene

Proteins for RPS27P19 Gene

Post-translational modifications for RPS27P19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27P19 Gene

Domains & Families for RPS27P19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS27P19 Gene

Function for RPS27P19 Gene

Phenotypes From GWAS Catalog for RPS27P19 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27P19 Gene

Localization for RPS27P19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27P19 Gene

Pathways & Interactions for RPS27P19 Gene

PathCards logo

SuperPathways for RPS27P19 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS27P19 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS27P19 Gene

Drugs & Compounds for RPS27P19 Gene

No Compound Related Data Available

Transcripts for RPS27P19 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27P19 Gene

No ASD Table

Relevant External Links for RPS27P19 Gene

GeneLoc Exon Structure for
RPS27P19

No data available for mRNA/cDNA for RPS27P19 Gene

Expression for RPS27P19 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS27P19 Gene

genes like me logo Genes that share expression patterns with RPS27P19: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27P19 Gene

Orthologs for RPS27P19 Gene

No data available for Orthologs and Evolution for RPS27P19 Gene

Paralogs for RPS27P19 Gene

No data available for Paralogs for RPS27P19 Gene

Variants for RPS27P19 Gene

Additional Variant Information for RPS27P19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27P19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27P19 Gene

Disorders for RPS27P19 Gene

Additional Disease Information for RPS27P19

Genetic Association Database
(GAD)

No disorders were found for RPS27P19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27P19 Gene

Publications for RPS27P19 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3
  2. Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project. (PMID: 21347282) Lettre G … Boerwinkle E (PLoS genetics 2011) 41

Products for RPS27P19 Gene

Sources for RPS27P19 Gene