Aliases for RPS27AP19 Gene

Aliases for RPS27AP19 Gene

  • RPS27A Pseudogene 19 2 3
  • Ribosomal Protein S27a Pseudogene 19 2 3 5
  • RPS27AP19 5

External Ids for RPS27AP19 Gene

Previous GeneCards Identifiers for RPS27AP19 Gene

  • GC19U902208

Summaries for RPS27AP19 Gene

GeneCards Summary for RPS27AP19 Gene

RPS27AP19 (RPS27A Pseudogene 19) is a Pseudogene.

Additional gene information for RPS27AP19 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS27AP19 Gene

Genomics for RPS27AP19 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS27AP19 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19J007666 Enhancer 0.2 Ensembl 600.7 +1.2 1184 0.2 RPS27AP19 lnc-RETN-1 RETN PCP2
GH19J007664 Enhancer 0.2 Ensembl 600.7 0.0 -16 1.8 RPS27AP19 lnc-RETN-1 XAB2 RETN AB372643-008 PCP2
GH19J007656 Enhancer 0.9 FANTOM5 ENCODE 0.4 -7.7 -7712 2.5 SP1 RFX1 FOS PKNOX1 POLR2A CEBPA SCRT2 SP2 RUNX3 NR2C2 AB372643-008 XAB2 PCP2 STXBP2 MCEMP1 MCOLN1 PEX11G RPS27AP19 lnc-RETN-1 RETN
GH19J007660 Enhancer 0.4 Ensembl 0.7 -4.0 -4016 2.6 ZNF623 ZNF664 SPI1 ZNF121 XAB2 RPS27AP19 lnc-RETN-1 AB372643-008 RETN PCP2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS27AP19 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS27AP19 Gene

Genomic Locations for RPS27AP19 Gene
chr19:7,665,717-7,666,486
(GRCh38/hg38)
Size:
770 bases
Orientation:
Plus strand
chr19:7,730,603-7,731,362
(GRCh37/hg19)
Size:
760 bases
Orientation:
Plus strand

Genomic View for RPS27AP19 Gene

Genes around RPS27AP19 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27AP19 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27AP19 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27AP19 Gene

Proteins for RPS27AP19 Gene

Post-translational modifications for RPS27AP19 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27AP19 Gene

Domains & Families for RPS27AP19 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS27AP19 Gene

Function for RPS27AP19 Gene

Phenotypes From GWAS Catalog for RPS27AP19 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27AP19 Gene

Localization for RPS27AP19 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27AP19 Gene

Pathways & Interactions for RPS27AP19 Gene

PathCards logo

SuperPathways for RPS27AP19 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS27AP19 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS27AP19 Gene

Drugs & Compounds for RPS27AP19 Gene

No Compound Related Data Available

Transcripts for RPS27AP19 Gene

mRNA/cDNA for RPS27AP19 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27AP19 Gene

No ASD Table

Relevant External Links for RPS27AP19 Gene

GeneLoc Exon Structure for
RPS27AP19

Expression for RPS27AP19 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27AP19 Gene

Orthologs for RPS27AP19 Gene

Evolution for RPS27AP19 Gene

ENSEMBL:
Gene Tree for RPS27AP19 (if available)
TreeFam:
Gene Tree for RPS27AP19 (if available)

No data available for Orthologs for RPS27AP19 Gene

Paralogs for RPS27AP19 Gene

No data available for Paralogs for RPS27AP19 Gene

Variants for RPS27AP19 Gene

Additional Variant Information for RPS27AP19 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS27AP19

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27AP19 Gene

Disorders for RPS27AP19 Gene

No disorders were found for RPS27AP19 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS27AP19 Gene

Publications for RPS27AP19 Gene

No publications were found for RPS27AP19 Gene.

No data available for Mastermind for RPS27AP19 Gene

Products for RPS27AP19 Gene

Sources for RPS27AP19 Gene