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Aliases for RPS27AP11 Gene

Aliases for RPS27AP11 Gene

  • Ribosomal Protein S27a Pseudogene 11 2 3 5
  • RPS27A_4_740 3

External Ids for RPS27AP11 Gene

Previous GeneCards Identifiers for RPS27AP11 Gene

  • GC06P114012
  • GC06P113903

Summaries for RPS27AP11 Gene

GeneCards Summary for RPS27AP11 Gene

RPS27AP11 (Ribosomal Protein S27a Pseudogene 11) is a Pseudogene.

Additional gene information for RPS27AP11 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS27AP11 Gene

Genomics for RPS27AP11 Gene

GeneHancer (GH) Regulatory Elements for RPS27AP11 Gene

Promoters and enhancers for RPS27AP11 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH06I113968 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 26.3 +389.1 389128 3.2 CLOCK MLX ZFP64 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 SP3 NFYC HDAC2 HDAC2-AS2 RPS27AP11 FLJ34503
GH06I113854 Promoter/Enhancer 3 UCNEbase EPDnew FANTOM5 Ensembl ENCODE dbSUPER 10.5 +276.4 276357 7.5 HDGF PKNOX1 FOXA2 SMAD1 ARNT ARID4B SIN3A FEZF1 DMAP1 YBX1 MARCKS FLJ34503 RPS27AP11 HDAC2 GC06P113861
GH06I114341 Promoter/Enhancer 1.6 Ensembl ENCODE dbSUPER 12.2 +761.2 761235 3.1 ARID4B KLF17 SIN3A FEZF1 GLI4 ZNF2 RAD21 ZNF48 RARA ZNF335 HS3ST5 HDAC2 RPS27AP11 GC06M114221 RNA5SP213 HDAC2-AS2
GH06I113564 Enhancer 1.3 FANTOM5 Ensembl ENCODE 0.4 -16.2 -16234 2.1 ELF3 FOXA2 SIN3A RAD21 RARA YY1 ETS1 CREM MIXL1 RXRA LINC02541 MARCKS GC06P113558 PIR61489 RPS27AP11
GH06I113558 Enhancer 0.8 Ensembl ENCODE 0.3 -21.3 -21264 3.7 JUN NR2F2 ZNF7 GATA3 JUND POLR2A FOS FOSL2 PRDM10 GC06P113558 PIR61489 RPS27AP11
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS27AP11 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS27AP11 Gene

Genomic Locations for RPS27AP11 Gene
537 bases
Plus strand

Genomic View for RPS27AP11 Gene

Genes around RPS27AP11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS27AP11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS27AP11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS27AP11 Gene

Proteins for RPS27AP11 Gene

Post-translational modifications for RPS27AP11 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS27AP11 Gene

Domains & Families for RPS27AP11 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS27AP11 Gene

Function for RPS27AP11 Gene

Phenotypes From GWAS Catalog for RPS27AP11 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS27AP11 Gene

Localization for RPS27AP11 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS27AP11 Gene

Pathways & Interactions for RPS27AP11 Gene

SuperPathways for RPS27AP11 Gene

No Data Available

Interacting Proteins for RPS27AP11 Gene

Gene Ontology (GO) - Biological Process for RPS27AP11 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS27AP11 Gene

Drugs & Compounds for RPS27AP11 Gene

No Compound Related Data Available

Transcripts for RPS27AP11 Gene

mRNA/cDNA for RPS27AP11 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS27AP11 Gene

No ASD Table

Relevant External Links for RPS27AP11 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS27AP11 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS27AP11 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS27AP11 Gene:

genes like me logo Genes that share expression patterns with RPS27AP11: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS27AP11 Gene

Orthologs for RPS27AP11 Gene

Evolution for RPS27AP11 Gene

Gene Tree for RPS27AP11 (if available)
Gene Tree for RPS27AP11 (if available)

No data available for Orthologs for RPS27AP11 Gene

Paralogs for RPS27AP11 Gene

No data available for Paralogs for RPS27AP11 Gene

Variants for RPS27AP11 Gene

Additional Variant Information for RPS27AP11 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS27AP11 Gene

Disorders for RPS27AP11 Gene

Additional Disease Information for RPS27AP11

Genetic Association Database

No disorders were found for RPS27AP11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS27AP11 Gene

Publications for RPS27AP11 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for RPS27AP11 Gene

Sources for RPS27AP11 Gene

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