RPS26P17 Gene (Pseudogene)

Ribosomal Protein S26 Pseudogene 17

GC01P218338
GIFtS:
5
See more...

Aliases for RPS26P17 Gene

Aliases for RPS26P17 Gene

  • Ribosomal Protein S26 Pseudogene 17 2 3
  • RPS26_2_165 3

External Ids for RPS26P17 Gene

Previous GeneCards Identifiers for RPS26P17 Gene

  • GC01U902315
  • GC01P218512

Summaries for RPS26P17 Gene

GeneCards Summary for RPS26P17 Gene

RPS26P17 (Ribosomal Protein S26 Pseudogene 17) is a Pseudogene.

Additional gene information for RPS26P17 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS26P17 Gene

Genomics for RPS26P17 Gene

GeneHancer (GH) Regulatory Elements Pubs

Download GeneHancer 2017 data
Promoters and enhancers for RPS26P17 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH01J218335 Enhancer 0.9 Ensembl ENCODE dbSUPER 600.7 -2.0 -1992 1.3 FOXA1 SP1 EGR1 DDX20 PKNOX1 POLR2A SMARCA4 TCF7L2 ZNF217 BCL3 ENSG00000223375 RPS26P17 lnc-RRP15-2 RRP15 TGFB2 lnc-GPATCH2-7 ENSG00000229016
GH01J218339 Enhancer 0.6 Ensembl 600.7 +1.6 1555 1 REST CTCF ZNF24 RAD21 ZNF10 SMARCA5 ZNF444 EP400 CUX1 ZNF654 ENSG00000223375 RPS26P17 lnc-RRP15-2 RRP15 TGFB2
GH01J218341 Enhancer 0.3 Ensembl 0.7 +3.0 2955 0.2 RCOR1 GATA2 RRP15 RPS26P17 TGFB2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS26P17 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS26P17 Gene

Genomic Locations for RPS26P17 Gene
chr1:218,338,546-218,338,831
(GRCh38/hg38)
Size:
286 bases
Orientation:
Plus strand
chr1:218,511,883-218,512,173
(GRCh37/hg19)
Size:
291 bases
Orientation:
Plus strand

Genomic View for RPS26P17 Gene

Genes around RPS26P17 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS26P17 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS26P17 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for RPS26P17 Gene

Proteins for RPS26P17 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for RPS26P17 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS26P17 Gene

Domains & Families for RPS26P17 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS26P17 Gene

Function for RPS26P17 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS26P17 Gene

Localization for RPS26P17 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS26P17 Gene

Pathways & Interactions for RPS26P17 Gene

PathCards logo

SuperPathways for RPS26P17 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS26P17 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS26P17 Gene

Drugs & Compounds for RPS26P17 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for RPS26P17 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS26P17 Gene

No ASD Table

Relevant External Links for RPS26P17 Gene

GeneLoc Exon Structure for
RPS26P17

No data available for mRNA/cDNA for RPS26P17 Gene

Expression for RPS26P17 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS26P17 Gene

mRNA expression in normal human tissues for RPS26P17 Gene
mRNA expression by GTEx for RPS26P17 Gene
genes like me logo Genes that share expression patterns with RPS26P17: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS26P17 Gene

Orthologs for RPS26P17 Gene

No data available for Orthologs and Evolution for RPS26P17 Gene

Paralogs for RPS26P17 Gene

No data available for Paralogs for RPS26P17 Gene

Variants for RPS26P17 Gene

Additional Variant Information for RPS26P17 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS26P17

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS26P17 Gene

Disorders for RPS26P17 Gene

No disorders were found for RPS26P17 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS26P17 Gene

Publications for RPS26P17 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

ExternalLinks

View latest publications for RPS26P17 gene in Mastermind

Products for RPS26P17 Gene

Sources for RPS26P17 Gene