Aliases for RPS26P16 Gene

Aliases for RPS26P16 Gene

  • Ribosomal Protein S26 Pseudogene 16 2 3
  • RPS26_3_133 3

External Ids for RPS26P16 Gene

Previous GeneCards Identifiers for RPS26P16 Gene

  • GC01U902356
  • GC01M179005
  • GC01M179037
  • GC01M179038

Summaries for RPS26P16 Gene

GeneCards Summary for RPS26P16 Gene

RPS26P16 (Ribosomal Protein S26 Pseudogene 16) is a Pseudogene.

Additional gene information for RPS26P16 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS26P16 Gene

Genomics for RPS26P16 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS26P16 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01J179033 Enhancer 0.7 ENCODE 600.7 +1.0 969 1.6 ZNF629 PRDM1 IKZF2 ZNF501 TRIM22 PKNOX1 ZBTB44 ARID3A RELB RUNX3 ENSG00000232750 RPS26P16 lnc-ABL2-2 TOR3A FAM20B
GH01J179036 Enhancer 0.7 ENCODE 600.7 -1.5 -1544 1.1 JUND PKNOX1 IKZF2 SOX6 RELB RUNX3 BCLAF1 ZBTB17 BCL11A NBN ENSG00000232750 RPS26P16 lnc-ABL2-2 TOR3A piR-39488-027 FAM20B
GH01J179040 Enhancer 0.8 dbSUPER 0.7 -4.5 -4519 0.4 ARHGAP35 LEF1 IKZF1 MTA2 BRD9 ZNF24 DPF2 TCF12 MGA NKRF piR-39488-027 piR-53562-031 TOR3A RPS26P16 FAM20B
GH01J179038 Enhancer 0.6 ENCODE 0.7 -3.3 -3313 1.2 PRDM1 ZNF24 ZNF600 SOX6 ZNF140 E2F5 CEBPG RCOR1 HDAC2 CEBPB CEP350 TOR3A FAM20B RPS26P16 piR-39488-027
GH01J179037 Enhancer 0.6 ENCODE 0.7 -2.3 -2303 0.2 SOX6 E2F5 FOXM1 BHLHE40 NR2F1 NR2F6 TCF12 IKZF1 TEAD4 CBFA2T2 RPS26P16 piR-39488-027 FAM20B TOR3A
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS26P16 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS26P16 Gene

Genomic Locations for RPS26P16 Gene
chr1:179,035,238-179,035,678
(GRCh38/hg38)
Size:
441 bases
Orientation:
Minus strand
chr1:179,004,366-179,004,809
(GRCh37/hg19)
Size:
444 bases
Orientation:
Minus strand

Genomic View for RPS26P16 Gene

Genes around RPS26P16 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS26P16 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS26P16 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS26P16 Gene

Proteins for RPS26P16 Gene

Post-translational modifications for RPS26P16 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS26P16 Gene

Domains & Families for RPS26P16 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS26P16 Gene

Function for RPS26P16 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS26P16 Gene

Localization for RPS26P16 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS26P16 Gene

Pathways & Interactions for RPS26P16 Gene

PathCards logo

SuperPathways for RPS26P16 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS26P16 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS26P16 Gene

Drugs & Compounds for RPS26P16 Gene

No Compound Related Data Available

Transcripts for RPS26P16 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for RPS26P16 Gene

No ASD Table

Relevant External Links for RPS26P16 Gene

GeneLoc Exon Structure for
RPS26P16

No data available for mRNA/cDNA for RPS26P16 Gene

Expression for RPS26P16 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS26P16 Gene

genes like me logo Genes that share expression patterns with RPS26P16: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS26P16 Gene

Orthologs for RPS26P16 Gene

No data available for Orthologs and Evolution for RPS26P16 Gene

Paralogs for RPS26P16 Gene

No data available for Paralogs for RPS26P16 Gene

Variants for RPS26P16 Gene

Additional Variant Information for RPS26P16 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS26P16

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS26P16 Gene

Disorders for RPS26P16 Gene

No disorders were found for RPS26P16 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS26P16 Gene

Publications for RPS26P16 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS26P16 Gene

Products for RPS26P16 Gene

Sources for RPS26P16 Gene