Aliases for RPS25P9 Gene

Aliases for RPS25P9 Gene

  • Ribosomal Protein S25 Pseudogene 9 2 3 5
  • RPS25_7_1060 3
  • RPS25P9 5

External Ids for RPS25P9 Gene

Previous GeneCards Identifiers for RPS25P9 Gene

  • GC10U901112
  • GC10M071959

Summaries for RPS25P9 Gene

GeneCards Summary for RPS25P9 Gene

RPS25P9 (Ribosomal Protein S25 Pseudogene 9) is a Pseudogene.

Additional gene information for RPS25P9 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS25P9 Gene

Genomics for RPS25P9 Gene

GeneHancer (GH) Regulatory Elements Pubs

Promoters and enhancers for RPS25P9 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10J070197 Enhancer 0.3 Ensembl 250.7 +1.7 1697 1.2 OSR2 RUNX3 RPS25P9 lnc-H2AFY2-2 lnc-PPA1-2 PPA1 SAR1A AIFM2 CALM2P2 TYSND1 HSALNG0078631 MK280269-008
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS25P9 on the GeneHancer Hub at the UCSC Golden Path

Genomic Locations for RPS25P9 Gene

Latest Assembly
chr10:70,198,963-70,199,298
(GRCh38/hg38)
Size:
336 bases
Orientation:
Minus strand

Previous Assembly
chr10:71,958,719-71,959,054
(GRCh37/hg19 by Entrez Gene)
Size:
336 bases
Orientation:
Minus strand

chr10:71,958,744-71,958,995
(GRCh37/hg19 by Ensembl)
Size:
252 bases
Orientation:
Minus strand

Genomic View for RPS25P9 Gene

Genes around RPS25P9 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS25P9 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS25P9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS25P9 Gene

Proteins for RPS25P9 Gene

Post-translational modifications for RPS25P9 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS25P9 Gene

Domains & Families for RPS25P9 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS25P9 Gene

Function for RPS25P9 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS25P9 Gene

Localization for RPS25P9 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS25P9 Gene

Pathways & Interactions for RPS25P9 Gene

PathCards logo

SuperPathways for RPS25P9 Gene

No Data Available

Gene Ontology (GO) - Biological Process for RPS25P9 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS25P9 Gene

Drugs & Compounds for RPS25P9 Gene

No Compound Related Data Available

Transcripts for RPS25P9 Gene

mRNA/cDNA for RPS25P9 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for RPS25P9 Gene

No ASD Table

Relevant External Links for RPS25P9 Gene

GeneLoc Exon Structure for
RPS25P9

Expression for RPS25P9 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS25P9 Gene

genes like me logo Genes that share expression patterns with RPS25P9: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS25P9 Gene

Orthologs for RPS25P9 Gene

Evolution for RPS25P9 Gene

ENSEMBL:
Gene Tree for RPS25P9 (if available)
TreeFam:
Gene Tree for RPS25P9 (if available)
Alliance of Genome Resources:
Additional Orthologs for RPS25P9

No data available for Orthologs for RPS25P9 Gene

Paralogs for RPS25P9 Gene

No data available for Paralogs for RPS25P9 Gene

Variants for RPS25P9 Gene

Additional Variant Information for RPS25P9 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS25P9
Leiden Open Variation Database (LOVD)
RPS25P9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , dbSNP identifiers (rs#s) for variants without ClinVar clinical significance , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS25P9 Gene

Disorders for RPS25P9 Gene

No disorders were found for RPS25P9 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS25P9 Gene

Publications for RPS25P9 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3

No data available for Mastermind for RPS25P9 Gene

Products for RPS25P9 Gene

Sources for RPS25P9 Gene