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Aliases for RPS25P6 Gene

Aliases for RPS25P6 Gene

  • Ribosomal Protein S25 Pseudogene 6 2 3
  • RPS25_4_602 3
  • HCG1640785 3
  • AC034236.1 5

External Ids for RPS25P6 Gene

Previous GeneCards Identifiers for RPS25P6 Gene

  • GC05M115417
  • GC05M115388

Summaries for RPS25P6 Gene

Entrez Gene Summary for RPS25P6 Gene

  • This gene appears to be an intronless pseudogene derived from the RPS25 gene. It contains an open reading frame that could produce a protein of the same or nearly the same size as that of the RPS25 gene, but there is no evidence for transcription of this locus so it is considered a pseudogene. [provided by RefSeq, Jul 2008]

GeneCards Summary for RPS25P6 Gene

RPS25P6 (Ribosomal Protein S25 Pseudogene 6) is a Pseudogene.

Additional gene information for RPS25P6 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS25P6 Gene

Genomics for RPS25P6 Gene

GeneHancer (GH) Regulatory Elements for RPS25P6 Gene

Promoters and enhancers for RPS25P6 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH05I116052 Promoter 0.5 Ensembl 550.8 +0.1 141 0.4 GC05M116052 RPS25P6 LVRN ENSG00000251118 RNU2-49P COMMD10 ARL14EPL
GH05I116076 Enhancer 1.1 FANTOM5 Ensembl ENCODE 0.3 -24.4 -24376 0.6 BACH1 BATF NFATC1 ATF7 ETV6 IKZF2 RUNX3 SRF JUNB DPF2 ENSG00000272265 LVRN ATG12 AP3S1 TMED7 COMMD10 ENSG00000271918 RPS25P6
GH05I116075 Enhancer 0.4 ENCODE 0.3 -23.4 -23437 0.2 L3MBTL2 SCRT2 LVRN ATG12 AP3S1 TMED7 ENSG00000272265 RPS25P6
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS25P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS25P6 Gene

Genomic Locations for RPS25P6 Gene
487 bases
Minus strand

Genomic View for RPS25P6 Gene

Genes around RPS25P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS25P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS25P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS25P6 Gene

Proteins for RPS25P6 Gene

Post-translational modifications for RPS25P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS25P6 Gene

Domains & Families for RPS25P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS25P6 Gene

Function for RPS25P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS25P6 Gene

Localization for RPS25P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS25P6 Gene

Pathways & Interactions for RPS25P6 Gene

SuperPathways for RPS25P6 Gene

No Data Available

Interacting Proteins for RPS25P6 Gene

Gene Ontology (GO) - Biological Process for RPS25P6 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS25P6 Gene

Drugs & Compounds for RPS25P6 Gene

No Compound Related Data Available

Transcripts for RPS25P6 Gene

mRNA/cDNA for RPS25P6 Gene

(1) REFSEQ mRNAs :
(200) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS25P6 Gene

No ASD Table

Relevant External Links for RPS25P6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS25P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS25P6 Gene

Protein differential expression in normal tissues from HIPED for RPS25P6 Gene

This gene is overexpressed in Heart (57.3) and Brain (11.7).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for RPS25P6 Gene

Protein tissue co-expression partners for RPS25P6 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of RPS25P6 Gene:

genes like me logo Genes that share expression patterns with RPS25P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS25P6 Gene

Orthologs for RPS25P6 Gene

Evolution for RPS25P6 Gene

Gene Tree for RPS25P6 (if available)
Gene Tree for RPS25P6 (if available)

No data available for Orthologs for RPS25P6 Gene

Paralogs for RPS25P6 Gene

No data available for Paralogs for RPS25P6 Gene

Variants for RPS25P6 Gene

Additional Variant Information for RPS25P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS25P6 Gene

Disorders for RPS25P6 Gene

No disorders were found for RPS25P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS25P6 Gene

Publications for RPS25P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. The sequence of the human genome. (PMID: 11181995) Venter JC … Zhu X (Science (New York, N.Y.) 2001) 3 58

Products for RPS25P6 Gene

Sources for RPS25P6 Gene

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