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Aliases for RPS25P3 Gene

Subcategory (RNA class) for RPS25P3 Gene


Aliases for RPS25P3 Gene

  • Ribosomal Protein S25 Pseudogene 3 2 3
  • RPS25_1_198 3
  • AC012065.2 5

External Ids for RPS25P3 Gene

ORGUL Members for RPS25P3 Gene

Previous GeneCards Identifiers for RPS25P3 Gene

  • GC02U901646
  • GC02M020808

Summaries for RPS25P3 Gene

GeneCards Summary for RPS25P3 Gene

RPS25P3 (Ribosomal Protein S25 Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

Additional gene information for RPS25P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS25P3 Gene

Genomics for RPS25P3 Gene

GeneHancer (GH) Regulatory Elements for RPS25P3 Gene

Promoters and enhancers for RPS25P3 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH02I020604 Enhancer 0.8 Ensembl ENCODE dbSUPER 550.8 +1.6 1574 1.1 JUND POLR2A RPS25P3 RHOB ENSG00000228950 GDF7 HS1BP3-IT1 HS1BP3
GH02I020608 Enhancer 1.6 FANTOM5 Ensembl ENCODE dbSUPER 0.8 -3.9 -3948 3.5 FOXA2 MLX ARID4B DMAP1 ZNF48 ETS1 YY1 TCF12 ZNF766 FOS HS1BP3 SDC1 ENSG00000269976 RPS25P3 GC02M020612
GH02I020592 Enhancer 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.4 +10.1 10091 8.5 HDGF PKNOX1 FOXA2 SMAD1 MLX ZFP64 ARID4B DMAP1 IRF4 YY1 RHOB GDF7 ENSG00000228950 APOB HS1BP3 HS1BP3-IT1 RPS25P3
GH02I020601 Enhancer 0.8 ENCODE dbSUPER 0.4 +5.3 5276 0.5 SMARCA5 BCOR CTCF NFRKB E4F1 RAD21 ZNF592 ZFHX2 ZNF766 EGR1 ENSG00000228950 RHOB GDF7 HS1BP3-IT1 RPS25P3 HS1BP3
GH02I020612 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.4 -6.6 -6615 0.7 RCOR1 CHD2 ENSG00000269976 GC02M020612 RPS25P3 HS1BP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS25P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS25P3 Gene

Genomic Locations for RPS25P3 Gene
375 bases
Minus strand

Genomic View for RPS25P3 Gene

Genes around RPS25P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS25P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS25P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS25P3 Gene

Proteins for RPS25P3 Gene

Post-translational modifications for RPS25P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS25P3 Gene

Domains & Families for RPS25P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS25P3 Gene

Function for RPS25P3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS25P3 Gene

Localization for RPS25P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS25P3 Gene

Pathways & Interactions for RPS25P3 Gene

SuperPathways for RPS25P3 Gene

No Data Available

Interacting Proteins for RPS25P3 Gene

Gene Ontology (GO) - Biological Process for RPS25P3 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS25P3 Gene

Drugs & Compounds for RPS25P3 Gene

No Compound Related Data Available

Transcripts for RPS25P3 Gene

mRNA/cDNA for RPS25P3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS25P3 Gene

No ASD Table

Relevant External Links for RPS25P3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS25P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS25P3 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS25P3 Gene:

genes like me logo Genes that share expression patterns with RPS25P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS25P3 Gene

Orthologs for RPS25P3 Gene

Evolution for RPS25P3 Gene

Gene Tree for RPS25P3 (if available)
Gene Tree for RPS25P3 (if available)

No data available for Orthologs for RPS25P3 Gene

Paralogs for RPS25P3 Gene

No data available for Paralogs for RPS25P3 Gene

Variants for RPS25P3 Gene

Additional Variant Information for RPS25P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS25P3 Gene

Disorders for RPS25P3 Gene

No disorders were found for RPS25P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS25P3 Gene

Publications for RPS25P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

Products for RPS25P3 Gene

Sources for RPS25P3 Gene

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