Aliases for RPS23P4 Gene

Aliases for RPS23P4 Gene

  • Ribosomal Protein S23 Pseudogene 4 2 3 5
  • RPS23_1_526 3

External Ids for RPS23P4 Gene

Previous GeneCards Identifiers for RPS23P4 Gene

  • GC04U900985
  • GC04M146191

Summaries for RPS23P4 Gene

GeneCards Summary for RPS23P4 Gene

RPS23P4 (Ribosomal Protein S23 Pseudogene 4) is a Pseudogene.

Additional gene information for RPS23P4 Gene

No data available for Entrez Gene Summary , CIViC Summary , UniProtKB/Swiss-Prot Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , Rfam classification and piRNA Summary for RPS23P4 Gene

Genomics for RPS23P4 Gene

GeneHancer (GH) Regulatory Elements for RPS23P4 Gene

Promoters and enhancers for RPS23P4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J145275 Enhancer 1.4 Ensembl ENCODE CraniofacialAtlas dbSUPER 0.4 -11.0 -11047 12.4 ZSCAN5C JUND FOS ZNF639 ZNF10 MEF2C MYC JUN ATF2 MEF2A SMAD1 HSALNG0037642 piR-48759-233 lnc-OTUD4-2 RPS23P4
GH04J145234 Enhancer 0.6 Ensembl 0.3 +36.1 36057 1.8 CTCF REST RAD21 TRIM22 SMC3 SRF GATA3 ZNF654 YY1 ZBTB33 MMAA OTUD4 piR-45932-076 lnc-OTUD4-2 RPS23P4
GH04J145259 Enhancer 0.4 ENCODE 0.4 +10.3 10319 0.8 USF1 SP1 NANOG lnc-OTUD4-2 RPS23P4 piR-45932-076
GH04J145232 Enhancer 0.4 Ensembl 0.3 +38.1 38057 0.6 JUND ZBTB40 MITF POLR2A MMAA OTUD4 piR-45932-076 lnc-OTUD4-2 RPS23P4
GH04J145230 Enhancer 0.4 Ensembl 0.3 +39.7 39657 0.2 JUND FOS POLR2A MMAA SMAD1 piR-45932-076 lnc-OTUD4-2 RPS23P4
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS23P4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS23P4 Gene

Genomic Locations for RPS23P4 Gene
chr4:145,269,810-145,270,558
(GRCh38/hg38)
Size:
749 bases
Orientation:
Minus strand
chr4:146,190,962-146,191,710
(GRCh37/hg19)
Size:
749 bases
Orientation:
Minus strand

Genomic View for RPS23P4 Gene

Genes around RPS23P4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS23P4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS23P4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS23P4 Gene

Proteins for RPS23P4 Gene

Post-translational modifications for RPS23P4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS23P4 Gene

Domains & Families for RPS23P4 Gene

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences , Graphical View of Domain Structure and UniProtKB/Swiss-Prot for RPS23P4 Gene

Function for RPS23P4 Gene

Phenotypes From GWAS Catalog for RPS23P4 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS23P4 Gene

Localization for RPS23P4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS23P4 Gene

Pathways & Interactions for RPS23P4 Gene

PathCards logo

SuperPathways for RPS23P4 Gene

No Data Available
;

Gene Ontology (GO) - Biological Process for RPS23P4 Gene

None

No data available for Pathways by source , Interacting Proteins and SIGNOR curated interactions for RPS23P4 Gene

Drugs & Compounds for RPS23P4 Gene

No Compound Related Data Available

Transcripts for RPS23P4 Gene

mRNA/cDNA for RPS23P4 Gene

1 Ensembl transcripts including schematic representations, and UCSC links to gene/alias where relevant :

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS23P4 Gene

No ASD Table

Relevant External Links for RPS23P4 Gene

GeneLoc Exon Structure for
RPS23P4

Expression for RPS23P4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for RPS23P4 Gene

genes like me logo Genes that share expression patterns with RPS23P4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS23P4 Gene

Orthologs for RPS23P4 Gene

Evolution for RPS23P4 Gene

ENSEMBL:
Gene Tree for RPS23P4 (if available)
TreeFam:
Gene Tree for RPS23P4 (if available)

No data available for Orthologs for RPS23P4 Gene

Paralogs for RPS23P4 Gene

No data available for Paralogs for RPS23P4 Gene

Variants for RPS23P4 Gene

Additional Variant Information for RPS23P4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS23P4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations, with clinical significance, from ClinVar and Humsavar, with links to dbSNP , Additional dbSNP identifiers (rs#s) , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS23P4 Gene

Disorders for RPS23P4 Gene

Additional Disease Information for RPS23P4

Genetic Association Database
(GAD)

No disorders were found for RPS23P4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for RPS23P4 Gene

Publications for RPS23P4 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 54
  2. A genome-wide association study of sporadic ALS in a homogenous Irish population. (PMID: 18057069) Cronin S … Hardiman O (Human molecular genetics 2008) 41 54

No data available for Mastermind for RPS23P4 Gene

Products for RPS23P4 Gene

Sources for RPS23P4 Gene