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Aliases for RPS21P6 Gene

Subcategory (RNA class) for RPS21P6 Gene


Aliases for RPS21P6 Gene

  • Ribosomal Protein S21 Pseudogene 6 2 3
  • RPS21_3_1599 3
  • AC090311.1 5

External Ids for RPS21P6 Gene

ORGUL Members for RPS21P6 Gene

Previous GeneCards Identifiers for RPS21P6 Gene

  • GC18U900484
  • GC18P044303

Summaries for RPS21P6 Gene

GeneCards Summary for RPS21P6 Gene

RPS21P6 (Ribosomal Protein S21 Pseudogene 6) is a Pseudogene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for RPS21P6 Gene

  • nc_conserved_region: Non-coding region of sequence similarity by descent from a common ancestor.

View fRNAdb secondary structures for RPS21P6

Additional gene information for RPS21P6 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for RPS21P6 Gene

Genomics for RPS21P6 Gene

GeneHancer (GH) Regulatory Elements for RPS21P6 Gene

Promoters and enhancers for RPS21P6 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH18I046723 Enhancer 0.2 dbSUPER 550.8 +1.4 1372 0.7 RPS21P6 ST8SIA5 LOC105372097
GH18I046718 Enhancer 0.8 Ensembl ENCODE dbSUPER 0.8 -4.1 -4094 1.6 JUND ZNF366 JUN ST8SIA5 RPS21P6 LOC105372096
GH18I046754 Promoter/Enhancer 1.4 EPDnew Ensembl ENCODE 0.3 +33.4 33388 3.9 CTCF KLF1 SUZ12 ZNF704 ZNF76 ZNF335 ZFHX2 POLR2A ZBTB48 PATZ1 LOC105372097 ST8SIA5 PIAS2 HDHD2 IER3IP1 RPS21P6
GH18I046710 Enhancer 1 ENCODE dbSUPER 0.4 -11.0 -11007 2.7 HDAC1 PKNOX1 ATF1 TAF9B TCF12 GATA2 ZNF366 ATF7 CREM ZNF148 ST8SIA5 PIAS2 RPS21P6 LOC105372096
GH18I046707 Enhancer 0.7 ENCODE dbSUPER 0.4 -15.8 -15832 0.2 ESRRA JUND FOS RARA RPS21P6 LOC105372096 ST8SIA5
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around RPS21P6 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS21P6 Gene

Genomic Locations for RPS21P6 Gene
249 bases
Plus strand

Genomic View for RPS21P6 Gene

Genes around RPS21P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS21P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS21P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS21P6 Gene

ORGUL Member Location for RPS21P6 Gene

ORGUL Member Location for RPS21P6 gene

Proteins for RPS21P6 Gene

Post-translational modifications for RPS21P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS21P6 Gene

Domains & Families for RPS21P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS21P6 Gene

Function for RPS21P6 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS21P6 Gene

Localization for RPS21P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS21P6 Gene

Pathways & Interactions for RPS21P6 Gene

SuperPathways for RPS21P6 Gene

No Data Available

Interacting Proteins for RPS21P6 Gene

Gene Ontology (GO) - Biological Process for RPS21P6 Gene


No data available for Pathways by source and SIGNOR curated interactions for RPS21P6 Gene

Drugs & Compounds for RPS21P6 Gene

No Compound Related Data Available

Transcripts for RPS21P6 Gene

fRNAdb Secondary structures for RPS21P6 Gene

  • FR137454

mRNA/cDNA for RPS21P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS21P6 Gene

No ASD Table

Relevant External Links for RPS21P6 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for RPS21P6 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS21P6 Gene

NURSA nuclear receptor signaling pathways regulating expression of RPS21P6 Gene:

genes like me logo Genes that share expression patterns with RPS21P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS21P6 Gene

Orthologs for RPS21P6 Gene

Evolution for RPS21P6 Gene

Gene Tree for RPS21P6 (if available)
Gene Tree for RPS21P6 (if available)

No data available for Orthologs for RPS21P6 Gene

Paralogs for RPS21P6 Gene

No data available for Paralogs for RPS21P6 Gene

Variants for RPS21P6 Gene

Additional Variant Information for RPS21P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS21P6 Gene

Disorders for RPS21P6 Gene

No disorders were found for RPS21P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS21P6 Gene

Publications for RPS21P6 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58
  2. RNAdb--a comprehensive mammalian noncoding RNA database. (PMID: 15608161) Pang KC … Mattick JS (Nucleic acids research 2005) 1
  3. Mapping of conserved RNA secondary structures predicts thousands of functional noncoding RNAs in the human genome. (PMID: 16273071) Washietl S … Stadler PF (Nature biotechnology 2005) 1

Products for RPS21P6 Gene

Sources for RPS21P6 Gene

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