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Aliases for RPS21P3 Gene

Aliases for RPS21P3 Gene

  • Ribosomal Protein S21 Pseudogene 3 2 3
  • RPS21_2_494 3

External Ids for RPS21P3 Gene

Previous GeneCards Identifiers for RPS21P3 Gene

  • GC04P079909
  • GC04P079690

Summaries for RPS21P3 Gene

GeneCards Summary for RPS21P3 Gene

RPS21P3 (Ribosomal Protein S21 Pseudogene 3) is a Pseudogene.

Additional gene information for RPS21P3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for RPS21P3 Gene

Genomics for RPS21P3 Gene

GeneHancer (GH) Regulatory Elements for RPS21P3 Gene

Promoters and enhancers for RPS21P3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04J078767 Enhancer 1.3 Ensembl ENCODE dbSUPER 600.7 -0.9 -948 7 CBFA2T2 MLLT1 SMARCA4 MTA1 IKZF1 GMEB1 DPF2 RFX1 IKZF2 ATF1 ENSG00000239793 RPS21P3 ENSG00000200998 BMP2K PAQR3 PIR40613
GH04J078749 Enhancer 1.3 FANTOM5 ENCODE dbSUPER 0.4 -18.1 -18061 2.2 SP1 ZNF687 JUND RELA SP7 CREM MLLT1 IKZF1 RXRA IKZF2 PIR40613 BMP2K RPS21P3
GH04J078754 Enhancer 0.5 Ensembl 0.4 -11.9 -11948 3.4 MAFK ZNF316 FOSL1 EMSY ENSG00000200998 PIR40613 RPS21P3
GH04J078761 Enhancer 0.2 Ensembl 0.4 -6.9 -6948 0.2 ENSG00000200998 RPS21P3 PIR40613
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data from 2017 publication | Request up-to-date GeneHancer data (full dataset)

GeneHancers around RPS21P3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for RPS21P3 Gene

Genomic Locations for RPS21P3 Gene
chr4:78,768,449-78,768,812
(GRCh38/hg38)
Size:
364 bases
Orientation:
Plus strand
chr4:79,689,603-79,689,966
(GRCh37/hg19)
Size:
364 bases
Orientation:
Plus strand

Genomic View for RPS21P3 Gene

Genes around RPS21P3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
RPS21P3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for RPS21P3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for RPS21P3 Gene

Proteins for RPS21P3 Gene

Post-translational modifications for RPS21P3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for RPS21P3 Gene

Domains & Families for RPS21P3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for RPS21P3 Gene

Function for RPS21P3 Gene

Phenotypes From GWAS Catalog for RPS21P3 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for RPS21P3 Gene

Localization for RPS21P3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for RPS21P3 Gene

Pathways & Interactions for RPS21P3 Gene

PathCards logo

SuperPathways for RPS21P3 Gene

No Data Available

Interacting Proteins for RPS21P3 Gene

Gene Ontology (GO) - Biological Process for RPS21P3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for RPS21P3 Gene

Drugs & Compounds for RPS21P3 Gene

No Compound Related Data Available

Transcripts for RPS21P3 Gene

CRISPR Products

Alternative Splicing Database (ASD) splice patterns (SP) for RPS21P3 Gene

No ASD Table

Relevant External Links for RPS21P3 Gene

GeneLoc Exon Structure for
RPS21P3
ECgene alternative splicing isoforms for
RPS21P3

No data available for mRNA/cDNA for RPS21P3 Gene

Expression for RPS21P3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for RPS21P3 Gene

mRNA differential expression in normal tissues according to GTEx for RPS21P3 Gene

This gene is overexpressed in Testis (x20.3), Brain - Hypothalamus (x5.0), and Brain - Spinal cord (cervical c-1) (x4.8).

NURSA nuclear receptor signaling pathways regulating expression of RPS21P3 Gene:

RPS21P3
genes like me logo Genes that share expression patterns with RPS21P3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for RPS21P3 Gene

Orthologs for RPS21P3 Gene

No data available for Orthologs and Evolution for RPS21P3 Gene

Paralogs for RPS21P3 Gene

No data available for Paralogs for RPS21P3 Gene

Variants for RPS21P3 Gene

Additional Variant Information for RPS21P3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
RPS21P3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for RPS21P3 Gene

Disorders for RPS21P3 Gene

No disorders were found for RPS21P3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for RPS21P3 Gene

Publications for RPS21P3 Gene

  1. Comparative analysis of processed ribosomal protein pseudogenes in four mammalian genomes. (PMID: 19123937) Balasubramanian S … Gerstein M (Genome biology 2009) 2 3 58

No data available for External Links for RPS21P3 Gene

Products for RPS21P3 Gene

Sources for RPS21P3 Gene

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